Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2068 and GFF2069 are separated by 198 nucleotides GFF2069 and GFF2070 overlap by 4 nucleotides GFF2070 and GFF2071 are separated by 85 nucleotides
GFF2068 - 2-hydroxy-3-oxopropionate reductase, at 748,638 to 749,558
GFF2068
GFF2069 - hypothetical protein, at 749,757 to 750,917
GFF2069
GFF2070 - hypothetical protein, at 750,914 to 751,603
GFF2070
GFF2071 - hypothetical protein, at 751,689 to 752,897
GFF2071
Position (kb) 749
750
751 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 749.187 kb on + strand, within GFF2068 at 749.199 kb on + strand, within GFF2068 at 749.199 kb on + strand, within GFF2068 at 749.199 kb on + strand, within GFF2068 at 749.200 kb on - strand, within GFF2068 at 749.292 kb on + strand, within GFF2068 at 749.293 kb on - strand, within GFF2068 at 749.311 kb on - strand, within GFF2068 at 749.376 kb on + strand, within GFF2068 at 749.376 kb on + strand, within GFF2068 at 749.376 kb on + strand, within GFF2068 at 749.441 kb on - strand, within GFF2068 at 749.442 kb on + strand, within GFF2068 at 749.443 kb on - strand, within GFF2068 at 749.474 kb on + strand at 749.474 kb on + strand at 749.557 kb on - strand at 749.572 kb on + strand at 749.700 kb on - strand at 749.865 kb on + strand at 750.009 kb on + strand, within GFF2069 at 750.010 kb on - strand, within GFF2069 at 750.162 kb on + strand, within GFF2069 at 750.162 kb on + strand, within GFF2069 at 750.162 kb on + strand, within GFF2069 at 750.163 kb on - strand, within GFF2069 at 750.163 kb on - strand, within GFF2069 at 750.163 kb on - strand, within GFF2069 at 750.174 kb on + strand, within GFF2069 at 750.175 kb on - strand, within GFF2069 at 750.195 kb on + strand, within GFF2069 at 750.195 kb on + strand, within GFF2069 at 750.195 kb on + strand, within GFF2069 at 750.196 kb on - strand, within GFF2069 at 750.196 kb on - strand, within GFF2069 at 750.196 kb on - strand, within GFF2069 at 750.196 kb on - strand, within GFF2069 at 750.459 kb on + strand, within GFF2069 at 750.459 kb on + strand, within GFF2069 at 750.459 kb on + strand, within GFF2069 at 750.598 kb on - strand, within GFF2069 at 751.511 kb on + strand, within GFF2070 at 751.602 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 749,187 + GFF2068 0.60 +0.7 749,199 + GFF2068 0.61 +0.1 749,199 + GFF2068 0.61 +0.4 749,199 + GFF2068 0.61 +0.4 749,200 - GFF2068 0.61 +1.1 749,292 + GFF2068 0.71 +0.3 749,293 - GFF2068 0.71 +0.3 749,311 - GFF2068 0.73 -0.9 749,376 + GFF2068 0.80 -1.2 749,376 + GFF2068 0.80 -1.1 749,376 + GFF2068 0.80 +0.6 749,441 - GFF2068 0.87 -0.8 749,442 + GFF2068 0.87 +1.5 749,443 - GFF2068 0.87 -1.9 749,474 + -0.1 749,474 + -1.3 749,557 - -0.7 749,572 + -0.3 749,700 - +0.3 749,865 + -0.7 750,009 + GFF2069 0.22 -0.3 750,010 - GFF2069 0.22 +0.1 750,162 + GFF2069 0.35 +0.2 750,162 + GFF2069 0.35 -0.8 750,162 + GFF2069 0.35 -0.2 750,163 - GFF2069 0.35 +0.5 750,163 - GFF2069 0.35 -2.8 750,163 - GFF2069 0.35 +0.2 750,174 + GFF2069 0.36 -0.3 750,175 - GFF2069 0.36 +0.6 750,195 + GFF2069 0.38 +0.1 750,195 + GFF2069 0.38 -0.1 750,195 + GFF2069 0.38 -0.4 750,196 - GFF2069 0.38 -0.8 750,196 - GFF2069 0.38 +0.1 750,196 - GFF2069 0.38 +0.8 750,196 - GFF2069 0.38 +1.1 750,459 + GFF2069 0.60 +0.6 750,459 + GFF2069 0.60 -0.2 750,459 + GFF2069 0.60 +0.9 750,598 - GFF2069 0.72 -0.5 751,511 + GFF2070 0.87 -1.0 751,602 - -0.9
Or see this region's nucleotide sequence