Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1960 and GFF1961 are separated by 89 nucleotides GFF1961 and GFF1962 are separated by 261 nucleotides
GFF1960 - hypothetical protein, at 616,685 to 617,569
GFF1960
GFF1961 - hypothetical protein, at 617,659 to 618,063
GFF1961
GFF1962 - Electron transfer flavoprotein-ubiquinone oxidoreductase, at 618,325 to 619,998
GFF1962
Position (kb) 617
618
619 Strain fitness (log2 ratio) -2
-1
0
1 at 617.580 kb on + strand at 617.580 kb on + strand at 617.581 kb on - strand at 617.581 kb on - strand at 617.687 kb on + strand at 617.739 kb on - strand, within GFF1961 at 617.744 kb on + strand, within GFF1961 at 617.744 kb on + strand, within GFF1961 at 617.744 kb on + strand, within GFF1961 at 617.744 kb on + strand, within GFF1961 at 617.745 kb on - strand, within GFF1961 at 617.745 kb on - strand, within GFF1961 at 617.745 kb on - strand, within GFF1961 at 617.745 kb on - strand, within GFF1961 at 617.745 kb on - strand, within GFF1961 at 617.795 kb on + strand, within GFF1961 at 617.796 kb on - strand, within GFF1961 at 617.796 kb on - strand, within GFF1961 at 617.849 kb on + strand, within GFF1961 at 617.850 kb on - strand, within GFF1961 at 617.850 kb on - strand, within GFF1961 at 617.850 kb on - strand, within GFF1961 at 617.850 kb on - strand, within GFF1961 at 617.850 kb on - strand, within GFF1961 at 617.951 kb on + strand, within GFF1961 at 617.952 kb on - strand, within GFF1961 at 618.095 kb on + strand at 618.095 kb on + strand at 618.095 kb on + strand at 618.215 kb on - strand at 618.226 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 617,580 + +0.9 617,580 + -0.0 617,581 - +1.4 617,581 - -0.6 617,687 + +0.1 617,739 - GFF1961 0.20 -0.0 617,744 + GFF1961 0.21 +0.3 617,744 + GFF1961 0.21 +0.7 617,744 + GFF1961 0.21 -0.9 617,744 + GFF1961 0.21 +0.0 617,745 - GFF1961 0.21 +0.6 617,745 - GFF1961 0.21 +0.4 617,745 - GFF1961 0.21 -1.1 617,745 - GFF1961 0.21 -0.1 617,745 - GFF1961 0.21 -0.7 617,795 + GFF1961 0.34 +0.0 617,796 - GFF1961 0.34 -2.0 617,796 - GFF1961 0.34 +0.6 617,849 + GFF1961 0.47 -0.7 617,850 - GFF1961 0.47 -0.1 617,850 - GFF1961 0.47 +0.4 617,850 - GFF1961 0.47 -0.5 617,850 - GFF1961 0.47 +0.3 617,850 - GFF1961 0.47 +0.6 617,951 + GFF1961 0.72 +1.0 617,952 - GFF1961 0.72 +0.6 618,095 + -0.6 618,095 + +0.0 618,095 + +0.2 618,215 - +1.5 618,226 + -0.7
Or see this region's nucleotide sequence