Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1909 and GFF1910 are separated by 279 nucleotides GFF1910 and GFF1911 are separated by 122 nucleotides
GFF1909 - hypothetical protein, at 567,350 to 569,401
GFF1909
GFF1910 - putative sulfoacetate transporter SauU, at 569,681 to 570,889
GFF1910
GFF1911 - putative FAD-linked oxidoreductase, at 571,012 to 572,460
GFF1911
Position (kb) 569
570
571 Strain fitness (log2 ratio) -2
-1
0
1 at 568.772 kb on + strand, within GFF1909 at 568.772 kb on + strand, within GFF1909 at 568.772 kb on + strand, within GFF1909 at 568.773 kb on - strand, within GFF1909 at 568.773 kb on - strand, within GFF1909 at 568.779 kb on - strand, within GFF1909 at 568.862 kb on - strand, within GFF1909 at 568.876 kb on - strand, within GFF1909 at 568.876 kb on - strand, within GFF1909 at 568.983 kb on - strand, within GFF1909 at 568.983 kb on - strand, within GFF1909 at 568.983 kb on - strand, within GFF1909 at 569.018 kb on + strand, within GFF1909 at 569.018 kb on + strand, within GFF1909 at 569.018 kb on + strand, within GFF1909 at 569.019 kb on - strand, within GFF1909 at 569.019 kb on - strand, within GFF1909 at 569.019 kb on - strand, within GFF1909 at 569.019 kb on - strand, within GFF1909 at 569.019 kb on - strand, within GFF1909 at 569.126 kb on + strand, within GFF1909 at 569.174 kb on + strand, within GFF1909 at 569.175 kb on - strand, within GFF1909 at 569.176 kb on + strand, within GFF1909 at 569.177 kb on - strand, within GFF1909 at 569.177 kb on - strand, within GFF1909 at 569.366 kb on + strand at 569.366 kb on + strand at 569.367 kb on - strand at 569.454 kb on + strand at 569.454 kb on + strand at 569.454 kb on + strand at 569.455 kb on - strand at 569.861 kb on + strand, within GFF1910 at 569.862 kb on - strand, within GFF1910 at 569.862 kb on - strand, within GFF1910 at 569.862 kb on - strand, within GFF1910 at 569.862 kb on - strand, within GFF1910 at 569.990 kb on + strand, within GFF1910 at 569.990 kb on + strand, within GFF1910 at 569.990 kb on + strand, within GFF1910 at 569.991 kb on - strand, within GFF1910 at 569.991 kb on - strand, within GFF1910 at 570.041 kb on + strand, within GFF1910 at 570.157 kb on - strand, within GFF1910 at 570.362 kb on + strand, within GFF1910 at 570.363 kb on - strand, within GFF1910 at 570.363 kb on - strand, within GFF1910 at 570.738 kb on - strand, within GFF1910 at 570.870 kb on + strand at 570.887 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 568,772 + GFF1909 0.69 -0.3 568,772 + GFF1909 0.69 -1.4 568,772 + GFF1909 0.69 -0.9 568,773 - GFF1909 0.69 -0.9 568,773 - GFF1909 0.69 -1.1 568,779 - GFF1909 0.70 -1.3 568,862 - GFF1909 0.74 -0.3 568,876 - GFF1909 0.74 +0.2 568,876 - GFF1909 0.74 -0.7 568,983 - GFF1909 0.80 -0.6 568,983 - GFF1909 0.80 -0.7 568,983 - GFF1909 0.80 -0.5 569,018 + GFF1909 0.81 -1.0 569,018 + GFF1909 0.81 -1.1 569,018 + GFF1909 0.81 -1.3 569,019 - GFF1909 0.81 -1.0 569,019 - GFF1909 0.81 -0.6 569,019 - GFF1909 0.81 -1.0 569,019 - GFF1909 0.81 -0.6 569,019 - GFF1909 0.81 +0.3 569,126 + GFF1909 0.87 +0.2 569,174 + GFF1909 0.89 +0.9 569,175 - GFF1909 0.89 -1.9 569,176 + GFF1909 0.89 +0.4 569,177 - GFF1909 0.89 +0.3 569,177 - GFF1909 0.89 -0.1 569,366 + -1.1 569,366 + -0.6 569,367 - +0.3 569,454 + -1.2 569,454 + -0.2 569,454 + -0.9 569,455 - +0.3 569,861 + GFF1910 0.15 +0.8 569,862 - GFF1910 0.15 +0.4 569,862 - GFF1910 0.15 +0.3 569,862 - GFF1910 0.15 +0.7 569,862 - GFF1910 0.15 -0.8 569,990 + GFF1910 0.26 +0.9 569,990 + GFF1910 0.26 +0.4 569,990 + GFF1910 0.26 -0.2 569,991 - GFF1910 0.26 -0.9 569,991 - GFF1910 0.26 -0.8 570,041 + GFF1910 0.30 -1.0 570,157 - GFF1910 0.39 +1.2 570,362 + GFF1910 0.56 -1.0 570,363 - GFF1910 0.56 +1.3 570,363 - GFF1910 0.56 +0.8 570,738 - GFF1910 0.87 -0.7 570,870 + -0.3 570,887 + -0.0
Or see this region's nucleotide sequence