Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1861 and GFF1862 are separated by 175 nucleotides GFF1862 and GFF1863 are separated by 100 nucleotides GFF1863 and GFF1864 are separated by 4 nucleotides GFF1864 and GFF1865 are separated by 91 nucleotides
GFF1861 - hypothetical protein, at 522,712 to 524,034
GFF1861
GFF1862 - hypothetical protein, at 524,210 to 524,611
GFF1862
GFF1863 - lipid kinase YegS, at 524,712 to 525,647
GFF1863
GFF1864 - hypothetical protein, at 525,652 to 526,440
GFF1864
GFF1865 - hypothetical protein, at 526,532 to 527,353
GFF1865
Position (kb) 524
525
526 Strain fitness (log2 ratio) -2
-1
0
1
2 at 523.712 kb on + strand, within GFF1861 at 523.713 kb on - strand, within GFF1861 at 524.015 kb on + strand at 524.016 kb on - strand at 524.016 kb on - strand at 524.362 kb on - strand, within GFF1862 at 524.397 kb on + strand, within GFF1862 at 524.400 kb on + strand, within GFF1862 at 524.400 kb on + strand, within GFF1862 at 524.401 kb on - strand, within GFF1862 at 524.731 kb on + strand at 524.932 kb on - strand, within GFF1863 at 525.547 kb on - strand, within GFF1863 at 525.720 kb on - strand at 525.912 kb on - strand, within GFF1864 at 526.055 kb on + strand, within GFF1864 at 526.056 kb on - strand, within GFF1864 at 526.287 kb on + strand, within GFF1864 at 526.287 kb on + strand, within GFF1864 at 526.287 kb on + strand, within GFF1864 at 526.289 kb on + strand, within GFF1864 at 526.290 kb on - strand, within GFF1864 at 526.409 kb on + strand at 526.409 kb on + strand at 526.409 kb on + strand at 526.409 kb on + strand at 526.409 kb on + strand at 526.409 kb on + strand at 526.409 kb on + strand at 526.410 kb on - strand at 526.410 kb on - strand at 526.410 kb on - strand at 526.542 kb on + strand at 526.542 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 523,712 + GFF1861 0.76 +0.3 523,713 - GFF1861 0.76 +0.3 524,015 + -1.1 524,016 - -0.5 524,016 - -0.1 524,362 - GFF1862 0.38 +0.5 524,397 + GFF1862 0.47 -1.2 524,400 + GFF1862 0.47 -0.3 524,400 + GFF1862 0.47 -0.8 524,401 - GFF1862 0.48 +0.9 524,731 + +2.3 524,932 - GFF1863 0.24 +0.7 525,547 - GFF1863 0.89 +0.3 525,720 - -0.4 525,912 - GFF1864 0.33 +2.1 526,055 + GFF1864 0.51 +0.7 526,056 - GFF1864 0.51 -0.1 526,287 + GFF1864 0.80 -0.8 526,287 + GFF1864 0.80 +0.9 526,287 + GFF1864 0.80 +1.3 526,289 + GFF1864 0.81 +0.4 526,290 - GFF1864 0.81 -0.4 526,409 + +0.3 526,409 + +0.3 526,409 + -0.1 526,409 + -2.5 526,409 + +0.2 526,409 + -0.6 526,409 + -0.2 526,410 - +1.3 526,410 - -0.2 526,410 - +0.3 526,542 + +1.5 526,542 + -0.5
Or see this region's nucleotide sequence