Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF182 and GFF183 are separated by 24 nucleotides GFF183 and GFF184 are separated by 3 nucleotides GFF184 and GFF185 are separated by 56 nucleotides
GFF182 - Long-chain-fatty-acid--CoA ligase FadD15, at 190,512 to 192,317
GFF182
GFF183 - Putative acyltransferase, at 192,342 to 193,550
GFF183
GFF184 - Fatty acid oxidation complex subunit alpha, at 193,554 to 194,465
GFF184
GFF185 - hypothetical protein, at 194,522 to 195,466
GFF185
Position (kb) 192
193
194 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 191.424 kb on + strand, within GFF182 at 191.523 kb on + strand, within GFF182 at 191.524 kb on - strand, within GFF182 at 191.649 kb on + strand, within GFF182 at 191.649 kb on + strand, within GFF182 at 191.650 kb on - strand, within GFF182 at 191.657 kb on + strand, within GFF182 at 191.703 kb on - strand, within GFF182 at 191.799 kb on + strand, within GFF182 at 191.799 kb on + strand, within GFF182 at 191.802 kb on + strand, within GFF182 at 191.802 kb on + strand, within GFF182 at 191.803 kb on - strand, within GFF182 at 191.803 kb on - strand, within GFF182 at 191.896 kb on + strand, within GFF182 at 191.896 kb on + strand, within GFF182 at 191.921 kb on + strand, within GFF182 at 191.921 kb on + strand, within GFF182 at 192.021 kb on + strand, within GFF182 at 192.022 kb on - strand, within GFF182 at 192.022 kb on - strand, within GFF182 at 192.022 kb on - strand, within GFF182 at 192.045 kb on + strand, within GFF182 at 192.046 kb on - strand, within GFF182 at 192.090 kb on + strand, within GFF182 at 192.286 kb on - strand at 192.310 kb on - strand at 192.354 kb on + strand at 192.355 kb on - strand at 192.355 kb on - strand at 192.355 kb on - strand at 192.355 kb on - strand at 192.355 kb on - strand at 192.573 kb on + strand, within GFF183 at 192.574 kb on - strand, within GFF183 at 192.822 kb on + strand, within GFF183 at 192.822 kb on + strand, within GFF183 at 192.822 kb on + strand, within GFF183 at 192.822 kb on + strand, within GFF183 at 192.822 kb on + strand, within GFF183 at 192.823 kb on - strand, within GFF183 at 192.823 kb on - strand, within GFF183 at 192.929 kb on + strand, within GFF183 at 192.930 kb on - strand, within GFF183 at 193.063 kb on - strand, within GFF183
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 191,424 + GFF182 0.50 -0.8 191,523 + GFF182 0.56 -0.7 191,524 - GFF182 0.56 -0.0 191,649 + GFF182 0.63 +0.8 191,649 + GFF182 0.63 -0.2 191,650 - GFF182 0.63 +0.1 191,657 + GFF182 0.63 -0.2 191,703 - GFF182 0.66 -3.3 191,799 + GFF182 0.71 +0.1 191,799 + GFF182 0.71 +0.6 191,802 + GFF182 0.71 +0.3 191,802 + GFF182 0.71 -0.9 191,803 - GFF182 0.71 -1.0 191,803 - GFF182 0.71 -0.6 191,896 + GFF182 0.77 -0.5 191,896 + GFF182 0.77 -1.0 191,921 + GFF182 0.78 -0.4 191,921 + GFF182 0.78 +0.3 192,021 + GFF182 0.84 +1.3 192,022 - GFF182 0.84 +0.2 192,022 - GFF182 0.84 +0.4 192,022 - GFF182 0.84 -0.1 192,045 + GFF182 0.85 -0.9 192,046 - GFF182 0.85 +0.2 192,090 + GFF182 0.87 -2.3 192,286 - +0.3 192,310 - +0.4 192,354 + +1.0 192,355 - -0.1 192,355 - +0.6 192,355 - +0.8 192,355 - +0.1 192,355 - +0.3 192,573 + GFF183 0.19 -0.2 192,574 - GFF183 0.19 -0.5 192,822 + GFF183 0.40 +1.4 192,822 + GFF183 0.40 -2.4 192,822 + GFF183 0.40 -1.0 192,822 + GFF183 0.40 -0.2 192,822 + GFF183 0.40 -0.1 192,823 - GFF183 0.40 -0.8 192,823 - GFF183 0.40 -1.1 192,929 + GFF183 0.49 -1.2 192,930 - GFF183 0.49 -0.7 193,063 - GFF183 0.60 -0.0
Or see this region's nucleotide sequence