Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1468 and GFF1469 are separated by 98 nucleotides GFF1469 and GFF1470 are separated by 87 nucleotides GFF1470 and GFF1471 are separated by 256 nucleotides
GFF1468 - hypothetical protein, at 106,945 to 108,639
GFF1468
GFF1469 - hypothetical protein, at 108,738 to 109,067
GFF1469
GFF1470 - hypothetical protein, at 109,155 to 109,673
GFF1470
GFF1471 - L-cysteine S-thiosulfotransferase subunit SoxA, at 109,930 to 110,760
GFF1471
Position (kb) 108
109
110 Strain fitness (log2 ratio) -1
0
1
2 at 108.290 kb on + strand, within GFF1468 at 108.291 kb on - strand, within GFF1468 at 108.291 kb on - strand, within GFF1468 at 108.332 kb on + strand, within GFF1468 at 108.333 kb on - strand, within GFF1468 at 108.333 kb on - strand, within GFF1468 at 108.450 kb on - strand, within GFF1468 at 108.450 kb on - strand, within GFF1468 at 108.845 kb on - strand, within GFF1469 at 109.153 kb on + strand at 109.205 kb on - strand at 109.205 kb on - strand at 109.309 kb on + strand, within GFF1470 at 109.309 kb on + strand, within GFF1470 at 109.309 kb on + strand, within GFF1470 at 109.724 kb on + strand at 109.838 kb on + strand at 109.838 kb on + strand at 109.838 kb on + strand at 109.839 kb on - strand at 109.839 kb on - strand at 109.839 kb on - strand at 109.927 kb on + strand at 109.927 kb on + strand at 109.927 kb on + strand at 109.928 kb on - strand at 109.928 kb on - strand at 109.928 kb on - strand at 109.928 kb on - strand at 110.042 kb on - strand, within GFF1471
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 108,290 + GFF1468 0.79 -0.4 108,291 - GFF1468 0.79 -0.5 108,291 - GFF1468 0.79 +0.3 108,332 + GFF1468 0.82 -0.1 108,333 - GFF1468 0.82 -0.0 108,333 - GFF1468 0.82 -1.4 108,450 - GFF1468 0.89 -0.2 108,450 - GFF1468 0.89 +0.6 108,845 - GFF1469 0.32 -1.0 109,153 + +0.0 109,205 - -0.2 109,205 - -0.3 109,309 + GFF1470 0.30 -0.7 109,309 + GFF1470 0.30 -0.1 109,309 + GFF1470 0.30 -1.3 109,724 + -0.7 109,838 + +0.3 109,838 + +2.1 109,838 + +0.6 109,839 - -0.1 109,839 - -0.1 109,839 - -0.7 109,927 + -0.3 109,927 + +0.5 109,927 + -1.3 109,928 - +0.4 109,928 - +0.3 109,928 - +0.7 109,928 - -0.1 110,042 - GFF1471 0.13 -0.1
Or see this region's nucleotide sequence