Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1419 and GFF1420 are separated by 63 nucleotides GFF1420 and GFF1421 are separated by 17 nucleotides GFF1421 and GFF1422 are separated by 251 nucleotides GFF1422 and GFF1423 are separated by 7 nucleotides
GFF1419 - Glucosamine kinase, at 40,164 to 43,367
GFF1419
GFF1420 - hypothetical protein, at 43,431 to 43,814
GFF1420
GFF1421 - hypothetical protein, at 43,832 to 44,788
GFF1421
GFF1422 - hypothetical protein, at 45,040 to 45,204
GFF1422
GFF1423 - hypothetical protein, at 45,212 to 45,703
GFF1423
Position (kb) 43
44
45 Strain fitness (log2 ratio) -1
0
1 at 43.182 kb on + strand at 43.262 kb on - strand at 43.262 kb on - strand at 43.731 kb on - strand, within GFF1420 at 43.813 kb on - strand at 43.889 kb on - strand at 43.995 kb on + strand, within GFF1421 at 43.995 kb on + strand, within GFF1421 at 43.996 kb on - strand, within GFF1421 at 44.214 kb on + strand, within GFF1421 at 44.214 kb on + strand, within GFF1421 at 44.215 kb on - strand, within GFF1421 at 44.215 kb on - strand, within GFF1421 at 44.215 kb on - strand, within GFF1421 at 44.215 kb on - strand, within GFF1421 at 44.541 kb on + strand, within GFF1421 at 44.542 kb on - strand, within GFF1421 at 44.542 kb on - strand, within GFF1421 at 44.542 kb on - strand, within GFF1421 at 44.542 kb on - strand, within GFF1421 at 44.542 kb on - strand, within GFF1421 at 44.542 kb on - strand, within GFF1421
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 43,182 + -0.3 43,262 - -0.8 43,262 - -1.7 43,731 - GFF1420 0.78 +0.3 43,813 - -0.5 43,889 - -1.1 43,995 + GFF1421 0.17 +0.4 43,995 + GFF1421 0.17 -0.1 43,996 - GFF1421 0.17 -0.2 44,214 + GFF1421 0.40 +0.0 44,214 + GFF1421 0.40 -1.2 44,215 - GFF1421 0.40 -0.5 44,215 - GFF1421 0.40 +0.4 44,215 - GFF1421 0.40 +1.2 44,215 - GFF1421 0.40 +0.3 44,541 + GFF1421 0.74 -0.2 44,542 - GFF1421 0.74 +0.3 44,542 - GFF1421 0.74 -0.6 44,542 - GFF1421 0.74 +0.3 44,542 - GFF1421 0.74 -0.1 44,542 - GFF1421 0.74 +0.5 44,542 - GFF1421 0.74 +0.0
Or see this region's nucleotide sequence