Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF13 and GFF14 are separated by 112 nucleotides GFF14 and GFF15 are separated by 93 nucleotides GFF15 and GFF16 are separated by 212 nucleotides
GFF13 - hypothetical protein, at 17,363 to 19,396
GFF13
GFF14 - hypothetical protein, at 19,509 to 20,594
GFF14
GFF15 - hypothetical protein, at 20,688 to 21,074
GFF15
GFF16 - Transcriptional regulator SlyA, at 21,287 to 21,760
GFF16
Position (kb) 19
20
21 Strain fitness (log2 ratio) -2
-1
0
1 at 18.719 kb on + strand, within GFF13 at 18.826 kb on - strand, within GFF13 at 18.892 kb on - strand, within GFF13 at 18.951 kb on + strand, within GFF13 at 18.951 kb on + strand, within GFF13 at 18.951 kb on + strand, within GFF13 at 18.952 kb on - strand, within GFF13 at 19.025 kb on - strand, within GFF13 at 19.025 kb on - strand, within GFF13 at 19.026 kb on + strand, within GFF13 at 19.026 kb on + strand, within GFF13 at 19.027 kb on - strand, within GFF13 at 19.027 kb on - strand, within GFF13 at 19.027 kb on - strand, within GFF13 at 19.027 kb on - strand, within GFF13 at 19.027 kb on - strand, within GFF13 at 19.027 kb on - strand, within GFF13 at 19.062 kb on + strand, within GFF13 at 19.242 kb on + strand at 19.242 kb on + strand at 19.243 kb on - strand at 19.243 kb on - strand at 19.407 kb on + strand at 19.533 kb on - strand at 19.533 kb on - strand at 19.707 kb on + strand, within GFF14 at 19.708 kb on - strand, within GFF14 at 19.768 kb on + strand, within GFF14 at 19.768 kb on + strand, within GFF14 at 19.769 kb on - strand, within GFF14 at 19.836 kb on + strand, within GFF14 at 19.836 kb on + strand, within GFF14 at 19.837 kb on - strand, within GFF14 at 19.837 kb on - strand, within GFF14 at 19.939 kb on - strand, within GFF14 at 20.229 kb on - strand, within GFF14 at 20.427 kb on + strand, within GFF14 at 20.428 kb on - strand, within GFF14 at 21.033 kb on + strand, within GFF15 at 21.034 kb on - strand, within GFF15 at 21.068 kb on - strand at 21.131 kb on + strand at 21.171 kb on + strand at 21.171 kb on + strand at 21.172 kb on - strand at 21.172 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 18,719 + GFF13 0.67 +0.2 18,826 - GFF13 0.72 +0.1 18,892 - GFF13 0.75 +0.5 18,951 + GFF13 0.78 -0.5 18,951 + GFF13 0.78 -0.0 18,951 + GFF13 0.78 -1.2 18,952 - GFF13 0.78 -0.3 19,025 - GFF13 0.82 -0.0 19,025 - GFF13 0.82 -1.4 19,026 + GFF13 0.82 +0.5 19,026 + GFF13 0.82 -0.1 19,027 - GFF13 0.82 -1.5 19,027 - GFF13 0.82 +0.1 19,027 - GFF13 0.82 +1.3 19,027 - GFF13 0.82 +0.3 19,027 - GFF13 0.82 +0.2 19,027 - GFF13 0.82 +1.0 19,062 + GFF13 0.84 -0.6 19,242 + +0.3 19,242 + +0.2 19,243 - -1.0 19,243 - -0.7 19,407 + +0.1 19,533 - -1.0 19,533 - -0.3 19,707 + GFF14 0.18 -0.7 19,708 - GFF14 0.18 +0.1 19,768 + GFF14 0.24 -0.5 19,768 + GFF14 0.24 -1.8 19,769 - GFF14 0.24 +0.5 19,836 + GFF14 0.30 -0.8 19,836 + GFF14 0.30 +0.1 19,837 - GFF14 0.30 +0.8 19,837 - GFF14 0.30 -0.8 19,939 - GFF14 0.40 -0.9 20,229 - GFF14 0.66 +1.1 20,427 + GFF14 0.85 -1.2 20,428 - GFF14 0.85 -2.3 21,033 + GFF15 0.89 +0.0 21,034 - GFF15 0.89 -0.6 21,068 - +0.6 21,131 + -0.0 21,171 + -0.3 21,171 + -1.1 21,172 - +0.1 21,172 - -1.0
Or see this region's nucleotide sequence