Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF113 and GFF114 are separated by 95 nucleotides GFF114 and GFF115 overlap by 1 nucleotides GFF115 and GFF116 are separated by 145 nucleotides
GFF113 - hypothetical protein, at 123,194 to 124,198
GFF113
GFF114 - Sugar fermentation stimulation protein A, at 124,294 to 125,007
GFF114
GFF115 - hypothetical protein, at 125,007 to 125,573
GFF115
GFF116 - Multidrug transporter EmrE, at 125,719 to 126,063
GFF116
Position (kb) 124
125
126 Strain fitness (log2 ratio) -2
-1
0
1
2 at 123.439 kb on - strand, within GFF113 at 123.439 kb on - strand, within GFF113 at 124.042 kb on - strand, within GFF113 at 124.406 kb on + strand, within GFF114 at 124.406 kb on + strand, within GFF114 at 124.407 kb on - strand, within GFF114 at 124.464 kb on + strand, within GFF114 at 124.465 kb on - strand, within GFF114 at 124.465 kb on - strand, within GFF114 at 124.465 kb on - strand, within GFF114 at 124.466 kb on + strand, within GFF114 at 124.466 kb on + strand, within GFF114 at 124.467 kb on - strand, within GFF114 at 124.467 kb on - strand, within GFF114 at 124.467 kb on - strand, within GFF114 at 124.467 kb on - strand, within GFF114 at 124.662 kb on - strand, within GFF114 at 125.134 kb on + strand, within GFF115 at 125.134 kb on + strand, within GFF115 at 125.134 kb on + strand, within GFF115 at 125.134 kb on + strand, within GFF115 at 125.134 kb on + strand, within GFF115 at 125.135 kb on - strand, within GFF115 at 125.135 kb on - strand, within GFF115 at 125.135 kb on - strand, within GFF115 at 125.236 kb on + strand, within GFF115 at 125.237 kb on - strand, within GFF115 at 125.336 kb on - strand, within GFF115 at 125.366 kb on - strand, within GFF115 at 125.542 kb on + strand at 125.596 kb on - strand at 125.740 kb on + strand at 125.740 kb on + strand at 125.740 kb on + strand at 125.741 kb on - strand at 125.741 kb on - strand at 125.747 kb on - strand at 125.747 kb on - strand at 125.782 kb on - strand, within GFF116 at 125.909 kb on - strand, within GFF116 at 125.909 kb on - strand, within GFF116 at 125.962 kb on + strand, within GFF116 at 125.963 kb on - strand, within GFF116
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 123,439 - GFF113 0.24 -0.4 123,439 - GFF113 0.24 +0.7 124,042 - GFF113 0.84 +0.3 124,406 + GFF114 0.16 -0.5 124,406 + GFF114 0.16 +0.5 124,407 - GFF114 0.16 -0.0 124,464 + GFF114 0.24 +0.7 124,465 - GFF114 0.24 +0.4 124,465 - GFF114 0.24 -1.2 124,465 - GFF114 0.24 +1.1 124,466 + GFF114 0.24 -1.2 124,466 + GFF114 0.24 -0.1 124,467 - GFF114 0.24 +0.1 124,467 - GFF114 0.24 -0.8 124,467 - GFF114 0.24 -0.2 124,467 - GFF114 0.24 +2.1 124,662 - GFF114 0.52 +0.6 125,134 + GFF115 0.22 +0.2 125,134 + GFF115 0.22 +0.5 125,134 + GFF115 0.22 -0.8 125,134 + GFF115 0.22 -0.7 125,134 + GFF115 0.22 -0.9 125,135 - GFF115 0.23 +2.1 125,135 - GFF115 0.23 -0.2 125,135 - GFF115 0.23 +0.0 125,236 + GFF115 0.40 +0.5 125,237 - GFF115 0.41 +0.4 125,336 - GFF115 0.58 -0.6 125,366 - GFF115 0.63 -0.7 125,542 + +0.1 125,596 - -0.5 125,740 + -0.1 125,740 + -2.0 125,740 + +0.1 125,741 - +0.1 125,741 - +1.5 125,747 - +0.5 125,747 - -0.6 125,782 - GFF116 0.18 -0.8 125,909 - GFF116 0.55 +0.4 125,909 - GFF116 0.55 +1.5 125,962 + GFF116 0.70 -0.7 125,963 - GFF116 0.71 +0.1
Or see this region's nucleotide sequence