Experiment: NL-CCM; spin-x control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06489 and MPMX19_06490 overlap by 4 nucleotides MPMX19_06490 and MPMX19_06491 are separated by 54 nucleotides MPMX19_06491 and MPMX19_06492 are separated by 223 nucleotides
MPMX19_06489: MPMX19_06489 - Taurine import ATP-binding protein TauB, at 272,483 to 273,286
_06489
MPMX19_06490: MPMX19_06490 - Putative aliphatic sulfonates transport permease protein SsuC, at 273,283 to 274,134
_06490
MPMX19_06491: MPMX19_06491 - Alpha-ketoglutarate-dependent taurine dioxygenase, at 274,189 to 275,040
_06491
MPMX19_06492: MPMX19_06492 - IS5 family transposase ISAzs10, at 275,264 to 276,343
_06492
Position (kb) 274
275
276 Strain fitness (log2 ratio) -2
-1
0
1
2 at 273.215 kb on + strand at 273.215 kb on + strand at 273.215 kb on + strand at 273.216 kb on - strand at 273.216 kb on - strand at 273.521 kb on - strand, within MPMX19_06490 at 273.521 kb on - strand, within MPMX19_06490 at 273.521 kb on - strand, within MPMX19_06490 at 273.521 kb on - strand, within MPMX19_06490 at 273.521 kb on - strand, within MPMX19_06490 at 273.521 kb on - strand, within MPMX19_06490 at 273.909 kb on - strand, within MPMX19_06490 at 274.603 kb on + strand, within MPMX19_06491 at 274.603 kb on + strand, within MPMX19_06491 at 274.603 kb on + strand, within MPMX19_06491 at 274.603 kb on + strand, within MPMX19_06491 at 274.603 kb on + strand, within MPMX19_06491 at 274.603 kb on + strand, within MPMX19_06491 at 274.604 kb on - strand, within MPMX19_06491 at 274.604 kb on - strand, within MPMX19_06491 at 274.604 kb on - strand, within MPMX19_06491 at 274.876 kb on + strand, within MPMX19_06491 at 274.876 kb on + strand, within MPMX19_06491 at 274.876 kb on + strand, within MPMX19_06491 at 274.877 kb on - strand, within MPMX19_06491 at 274.877 kb on - strand, within MPMX19_06491 at 274.884 kb on + strand, within MPMX19_06491 at 274.885 kb on - strand, within MPMX19_06491 at 274.885 kb on - strand, within MPMX19_06491 at 274.900 kb on + strand, within MPMX19_06491 at 274.900 kb on + strand, within MPMX19_06491 at 274.950 kb on + strand, within MPMX19_06491 at 274.950 kb on + strand, within MPMX19_06491 at 274.950 kb on + strand, within MPMX19_06491 at 274.950 kb on + strand, within MPMX19_06491 at 274.950 kb on + strand, within MPMX19_06491 at 274.951 kb on - strand, within MPMX19_06491 at 274.951 kb on - strand, within MPMX19_06491 at 274.951 kb on - strand, within MPMX19_06491 at 274.951 kb on - strand, within MPMX19_06491 at 274.982 kb on - strand at 275.001 kb on + strand at 275.001 kb on + strand at 275.001 kb on + strand at 275.001 kb on + strand at 275.001 kb on + strand at 275.001 kb on + strand at 275.002 kb on - strand at 275.036 kb on - strand at 275.072 kb on - strand at 275.103 kb on - strand at 275.184 kb on + strand at 275.184 kb on + strand at 275.306 kb on + strand at 275.306 kb on + strand at 275.306 kb on + strand at 275.306 kb on + strand at 275.307 kb on - strand at 275.307 kb on - strand at 275.307 kb on - strand at 275.307 kb on - strand at 275.307 kb on - strand at 275.307 kb on - strand at 275.307 kb on - strand at 275.412 kb on - strand, within MPMX19_06492 at 275.480 kb on + strand, within MPMX19_06492 at 275.480 kb on + strand, within MPMX19_06492 at 275.480 kb on + strand, within MPMX19_06492 at 275.480 kb on + strand, within MPMX19_06492 at 275.480 kb on + strand, within MPMX19_06492 at 275.480 kb on + strand, within MPMX19_06492 at 275.523 kb on - strand, within MPMX19_06492 at 275.523 kb on - strand, within MPMX19_06492 at 275.582 kb on - strand, within MPMX19_06492 at 275.582 kb on - strand, within MPMX19_06492 at 275.865 kb on - strand, within MPMX19_06492
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; spin-x control remove 273,215 + +0.2 273,215 + +0.9 273,215 + -0.9 273,216 - -0.1 273,216 - +1.7 273,521 - MPMX19_06490 0.28 -2.5 273,521 - MPMX19_06490 0.28 -1.3 273,521 - MPMX19_06490 0.28 -0.1 273,521 - MPMX19_06490 0.28 -1.2 273,521 - MPMX19_06490 0.28 +1.2 273,521 - MPMX19_06490 0.28 -0.8 273,909 - MPMX19_06490 0.73 -1.5 274,603 + MPMX19_06491 0.49 -0.5 274,603 + MPMX19_06491 0.49 -0.6 274,603 + MPMX19_06491 0.49 -1.4 274,603 + MPMX19_06491 0.49 -0.8 274,603 + MPMX19_06491 0.49 -0.7 274,603 + MPMX19_06491 0.49 -1.1 274,604 - MPMX19_06491 0.49 -2.0 274,604 - MPMX19_06491 0.49 -0.6 274,604 - MPMX19_06491 0.49 -0.1 274,876 + MPMX19_06491 0.81 -1.1 274,876 + MPMX19_06491 0.81 +0.2 274,876 + MPMX19_06491 0.81 -0.5 274,877 - MPMX19_06491 0.81 +0.4 274,877 - MPMX19_06491 0.81 -0.6 274,884 + MPMX19_06491 0.82 +0.6 274,885 - MPMX19_06491 0.82 -2.0 274,885 - MPMX19_06491 0.82 +0.8 274,900 + MPMX19_06491 0.83 -1.2 274,900 + MPMX19_06491 0.83 -0.9 274,950 + MPMX19_06491 0.89 -0.5 274,950 + MPMX19_06491 0.89 -0.6 274,950 + MPMX19_06491 0.89 -0.8 274,950 + MPMX19_06491 0.89 -0.7 274,950 + MPMX19_06491 0.89 -0.6 274,951 - MPMX19_06491 0.89 -0.5 274,951 - MPMX19_06491 0.89 +0.3 274,951 - MPMX19_06491 0.89 -0.4 274,951 - MPMX19_06491 0.89 +1.5 274,982 - -0.9 275,001 + +0.1 275,001 + +2.2 275,001 + -1.8 275,001 + +0.7 275,001 + -1.4 275,001 + -1.7 275,002 - +0.4 275,036 - +0.6 275,072 - -0.2 275,103 - -0.4 275,184 + +1.3 275,184 + +0.3 275,306 + +0.4 275,306 + +0.7 275,306 + -0.0 275,306 + -0.2 275,307 - -0.3 275,307 - +2.1 275,307 - +0.5 275,307 - +0.2 275,307 - +0.1 275,307 - -0.8 275,307 - +0.5 275,412 - MPMX19_06492 0.14 +0.4 275,480 + MPMX19_06492 0.20 -1.3 275,480 + MPMX19_06492 0.20 -0.9 275,480 + MPMX19_06492 0.20 -0.5 275,480 + MPMX19_06492 0.20 -0.1 275,480 + MPMX19_06492 0.20 -0.5 275,480 + MPMX19_06492 0.20 -0.1 275,523 - MPMX19_06492 0.24 -0.4 275,523 - MPMX19_06492 0.24 -0.3 275,582 - MPMX19_06492 0.29 -0.1 275,582 - MPMX19_06492 0.29 -0.1 275,865 - MPMX19_06492 0.56 +1.2
Or see this region's nucleotide sequence