Experiment: NL-CCM; spin-x control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06155 and MPMX19_06156 are separated by 194 nucleotides MPMX19_06156 and MPMX19_06157 are separated by 174 nucleotides MPMX19_06157 and MPMX19_06158 are separated by 43 nucleotides MPMX19_06158 and MPMX19_06159 are separated by 331 nucleotides
MPMX19_06155: MPMX19_06155 - Quinoprotein glucose dehydrogenase, at 339,757 to 342,204
_06155
MPMX19_06156: MPMX19_06156 - hypothetical protein, at 342,399 to 342,920
_06156
MPMX19_06157: MPMX19_06157 - hypothetical protein, at 343,095 to 343,304
_06157
MPMX19_06158: MPMX19_06158 - hypothetical protein, at 343,348 to 343,647
_06158
MPMX19_06159: MPMX19_06159 - N-carbamoyl-L-amino acid hydrolase, at 343,979 to 345,241
_06159
Position (kb) 343
344 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 342.453 kb on + strand, within MPMX19_06156 at 342.453 kb on + strand, within MPMX19_06156 at 342.454 kb on - strand, within MPMX19_06156 at 342.477 kb on + strand, within MPMX19_06156 at 342.477 kb on + strand, within MPMX19_06156 at 342.477 kb on + strand, within MPMX19_06156 at 342.478 kb on - strand, within MPMX19_06156 at 342.478 kb on - strand, within MPMX19_06156 at 343.008 kb on + strand at 343.009 kb on - strand at 343.009 kb on - strand at 343.009 kb on - strand at 343.019 kb on + strand at 343.055 kb on + strand at 343.055 kb on + strand at 343.055 kb on + strand at 343.056 kb on - strand at 343.056 kb on - strand at 343.245 kb on + strand, within MPMX19_06157 at 343.246 kb on - strand, within MPMX19_06157 at 343.246 kb on - strand, within MPMX19_06157 at 343.246 kb on - strand, within MPMX19_06157 at 343.246 kb on - strand, within MPMX19_06157 at 343.246 kb on - strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.278 kb on + strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.279 kb on - strand, within MPMX19_06157 at 343.349 kb on + strand at 343.349 kb on + strand at 343.349 kb on + strand at 343.349 kb on + strand at 343.349 kb on + strand at 343.349 kb on + strand at 343.349 kb on + strand at 343.349 kb on + strand at 343.350 kb on - strand at 343.350 kb on - strand at 343.350 kb on - strand at 343.350 kb on - strand at 343.350 kb on - strand at 343.350 kb on - strand at 343.350 kb on - strand at 343.350 kb on - strand at 343.350 kb on - strand at 343.350 kb on - strand at 343.350 kb on - strand at 343.691 kb on + strand at 343.692 kb on - strand at 343.692 kb on - strand at 343.692 kb on - strand at 343.704 kb on - strand at 343.739 kb on + strand at 343.739 kb on + strand at 343.740 kb on - strand at 343.740 kb on - strand at 343.771 kb on + strand at 343.771 kb on + strand at 343.779 kb on - strand at 343.916 kb on + strand at 343.916 kb on + strand at 343.916 kb on + strand at 343.916 kb on + strand at 343.916 kb on + strand at 343.916 kb on + strand at 343.916 kb on + strand at 343.917 kb on - strand at 343.917 kb on - strand at 343.917 kb on - strand at 343.917 kb on - strand at 343.917 kb on - strand at 343.917 kb on - strand at 343.917 kb on - strand at 343.918 kb on + strand at 343.918 kb on + strand at 343.919 kb on - strand at 343.919 kb on - strand at 343.919 kb on - strand at 343.919 kb on - strand at 343.919 kb on - strand at 344.087 kb on + strand at 344.087 kb on + strand at 344.087 kb on + strand at 344.087 kb on + strand at 344.087 kb on + strand at 344.087 kb on + strand at 344.088 kb on - strand at 344.088 kb on - strand at 344.088 kb on - strand at 344.088 kb on - strand at 344.088 kb on - strand at 344.088 kb on - strand at 344.088 kb on - strand at 344.192 kb on + strand, within MPMX19_06159 at 344.193 kb on - strand, within MPMX19_06159 at 344.267 kb on + strand, within MPMX19_06159 at 344.267 kb on + strand, within MPMX19_06159 at 344.268 kb on - strand, within MPMX19_06159 at 344.268 kb on - strand, within MPMX19_06159 at 344.268 kb on - strand, within MPMX19_06159 at 344.268 kb on - strand, within MPMX19_06159
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; spin-x control remove 342,453 + MPMX19_06156 0.10 -1.2 342,453 + MPMX19_06156 0.10 +0.2 342,454 - MPMX19_06156 0.11 -0.5 342,477 + MPMX19_06156 0.15 -0.5 342,477 + MPMX19_06156 0.15 -2.4 342,477 + MPMX19_06156 0.15 +0.3 342,478 - MPMX19_06156 0.15 +0.5 342,478 - MPMX19_06156 0.15 +0.5 343,008 + -0.1 343,009 - -0.4 343,009 - +0.8 343,009 - +0.5 343,019 + -0.9 343,055 + -0.3 343,055 + +0.0 343,055 + -0.6 343,056 - -0.1 343,056 - -0.9 343,245 + MPMX19_06157 0.71 +1.6 343,246 - MPMX19_06157 0.72 -2.3 343,246 - MPMX19_06157 0.72 +0.1 343,246 - MPMX19_06157 0.72 +1.5 343,246 - MPMX19_06157 0.72 -0.7 343,246 - MPMX19_06157 0.72 -1.3 343,278 + MPMX19_06157 0.87 +1.0 343,278 + MPMX19_06157 0.87 +0.9 343,278 + MPMX19_06157 0.87 +0.6 343,278 + MPMX19_06157 0.87 +2.2 343,278 + MPMX19_06157 0.87 +0.5 343,278 + MPMX19_06157 0.87 -0.5 343,278 + MPMX19_06157 0.87 -0.9 343,278 + MPMX19_06157 0.87 -0.7 343,278 + MPMX19_06157 0.87 -0.1 343,278 + MPMX19_06157 0.87 -0.9 343,278 + MPMX19_06157 0.87 -0.1 343,278 + MPMX19_06157 0.87 +0.3 343,278 + MPMX19_06157 0.87 -0.0 343,278 + MPMX19_06157 0.87 -0.3 343,278 + MPMX19_06157 0.87 +0.7 343,278 + MPMX19_06157 0.87 -0.3 343,278 + MPMX19_06157 0.87 -1.0 343,278 + MPMX19_06157 0.87 +0.3 343,278 + MPMX19_06157 0.87 -0.1 343,278 + MPMX19_06157 0.87 -0.5 343,278 + MPMX19_06157 0.87 -0.9 343,278 + MPMX19_06157 0.87 -0.5 343,278 + MPMX19_06157 0.87 +0.7 343,278 + MPMX19_06157 0.87 -1.2 343,278 + MPMX19_06157 0.87 -2.2 343,278 + MPMX19_06157 0.87 +1.0 343,278 + MPMX19_06157 0.87 -0.8 343,278 + MPMX19_06157 0.87 -0.9 343,278 + MPMX19_06157 0.87 -1.1 343,278 + MPMX19_06157 0.87 +1.2 343,278 + MPMX19_06157 0.87 +0.6 343,278 + MPMX19_06157 0.87 +0.7 343,278 + MPMX19_06157 0.87 -1.3 343,278 + MPMX19_06157 0.87 +1.1 343,278 + MPMX19_06157 0.87 +0.4 343,278 + MPMX19_06157 0.87 -0.5 343,278 + MPMX19_06157 0.87 -1.9 343,278 + MPMX19_06157 0.87 -1.7 343,278 + MPMX19_06157 0.87 +0.6 343,278 + MPMX19_06157 0.87 -0.8 343,278 + MPMX19_06157 0.87 -0.1 343,278 + MPMX19_06157 0.87 +1.5 343,278 + MPMX19_06157 0.87 -2.3 343,278 + MPMX19_06157 0.87 -0.1 343,278 + MPMX19_06157 0.87 +0.3 343,278 + MPMX19_06157 0.87 -1.7 343,278 + MPMX19_06157 0.87 -1.0 343,279 - MPMX19_06157 0.88 -0.5 343,279 - MPMX19_06157 0.88 -1.2 343,279 - MPMX19_06157 0.88 -1.9 343,279 - MPMX19_06157 0.88 +1.0 343,279 - MPMX19_06157 0.88 +0.9 343,279 - MPMX19_06157 0.88 +1.5 343,279 - MPMX19_06157 0.88 +0.5 343,279 - MPMX19_06157 0.88 -0.2 343,279 - MPMX19_06157 0.88 +0.3 343,279 - MPMX19_06157 0.88 +0.4 343,279 - MPMX19_06157 0.88 -0.3 343,279 - MPMX19_06157 0.88 +0.1 343,279 - MPMX19_06157 0.88 -0.9 343,279 - MPMX19_06157 0.88 -1.0 343,279 - MPMX19_06157 0.88 +0.9 343,279 - MPMX19_06157 0.88 -0.7 343,279 - MPMX19_06157 0.88 +0.7 343,279 - MPMX19_06157 0.88 +0.5 343,279 - MPMX19_06157 0.88 +0.5 343,279 - MPMX19_06157 0.88 -1.1 343,279 - MPMX19_06157 0.88 +0.7 343,279 - MPMX19_06157 0.88 -1.1 343,279 - MPMX19_06157 0.88 +0.1 343,279 - MPMX19_06157 0.88 -0.1 343,279 - MPMX19_06157 0.88 -0.4 343,279 - MPMX19_06157 0.88 -0.9 343,279 - MPMX19_06157 0.88 +0.1 343,279 - MPMX19_06157 0.88 +0.6 343,279 - MPMX19_06157 0.88 -0.1 343,279 - MPMX19_06157 0.88 -1.5 343,279 - MPMX19_06157 0.88 -2.1 343,279 - MPMX19_06157 0.88 +0.1 343,279 - MPMX19_06157 0.88 +0.1 343,279 - MPMX19_06157 0.88 +0.6 343,279 - MPMX19_06157 0.88 -1.2 343,279 - MPMX19_06157 0.88 +0.2 343,279 - MPMX19_06157 0.88 +0.5 343,279 - MPMX19_06157 0.88 -0.5 343,279 - MPMX19_06157 0.88 -0.2 343,279 - MPMX19_06157 0.88 +1.7 343,279 - MPMX19_06157 0.88 +0.3 343,279 - MPMX19_06157 0.88 -0.7 343,279 - MPMX19_06157 0.88 -0.7 343,279 - MPMX19_06157 0.88 +0.3 343,279 - MPMX19_06157 0.88 -0.1 343,279 - MPMX19_06157 0.88 -0.2 343,279 - MPMX19_06157 0.88 -0.8 343,279 - MPMX19_06157 0.88 +0.2 343,349 + -0.1 343,349 + +1.9 343,349 + -0.3 343,349 + +0.5 343,349 + +0.6 343,349 + -1.1 343,349 + +1.5 343,349 + -2.0 343,350 - -0.2 343,350 - -1.1 343,350 - +1.0 343,350 - +0.1 343,350 - +0.1 343,350 - +0.3 343,350 - -0.9 343,350 - +1.2 343,350 - -1.0 343,350 - -0.7 343,350 - -1.6 343,691 + -0.3 343,692 - +0.9 343,692 - -1.3 343,692 - +0.1 343,704 - -0.4 343,739 + +1.0 343,739 + -1.1 343,740 - +0.1 343,740 - -1.1 343,771 + -1.0 343,771 + -0.0 343,779 - -1.1 343,916 + -1.3 343,916 + -2.3 343,916 + -1.7 343,916 + -0.2 343,916 + -1.5 343,916 + +0.2 343,916 + -0.1 343,917 - +0.4 343,917 - +0.6 343,917 - +0.9 343,917 - -1.7 343,917 - -0.3 343,917 - +1.2 343,917 - -1.7 343,918 + -2.0 343,918 + +0.3 343,919 - -0.3 343,919 - -1.3 343,919 - +0.5 343,919 - -0.2 343,919 - -1.5 344,087 + -0.3 344,087 + -1.9 344,087 + -1.5 344,087 + +0.7 344,087 + +0.2 344,087 + +0.0 344,088 - -1.5 344,088 - -2.9 344,088 - +2.8 344,088 - -2.0 344,088 - +0.0 344,088 - +0.8 344,088 - +0.1 344,192 + MPMX19_06159 0.17 -0.2 344,193 - MPMX19_06159 0.17 -0.2 344,267 + MPMX19_06159 0.23 -1.3 344,267 + MPMX19_06159 0.23 +0.8 344,268 - MPMX19_06159 0.23 -2.5 344,268 - MPMX19_06159 0.23 -0.2 344,268 - MPMX19_06159 0.23 -1.1 344,268 - MPMX19_06159 0.23 +0.3
Or see this region's nucleotide sequence