Experiment: NL-CCM; spin-x control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06128 and MPMX19_06129 overlap by 1 nucleotides MPMX19_06129 and MPMX19_06130 are separated by 149 nucleotides
MPMX19_06128: MPMX19_06128 - hypothetical protein, at 313,872 to 316,703
_06128
MPMX19_06129: MPMX19_06129 - hypothetical protein, at 316,703 to 317,209
_06129
MPMX19_06130: MPMX19_06130 - hypothetical protein, at 317,359 to 319,071
_06130
Position (kb) 316
317
318 Strain fitness (log2 ratio) -2
-1
0
1
2 at 315.745 kb on + strand, within MPMX19_06128 at 315.832 kb on + strand, within MPMX19_06128 at 315.833 kb on - strand, within MPMX19_06128 at 315.833 kb on - strand, within MPMX19_06128 at 315.868 kb on + strand, within MPMX19_06128 at 315.868 kb on + strand, within MPMX19_06128 at 315.868 kb on + strand, within MPMX19_06128 at 315.868 kb on + strand, within MPMX19_06128 at 315.868 kb on + strand, within MPMX19_06128 at 315.869 kb on - strand, within MPMX19_06128 at 315.869 kb on - strand, within MPMX19_06128 at 315.869 kb on - strand, within MPMX19_06128 at 315.869 kb on - strand, within MPMX19_06128 at 315.869 kb on - strand, within MPMX19_06128 at 315.869 kb on - strand, within MPMX19_06128 at 315.869 kb on - strand, within MPMX19_06128 at 315.869 kb on - strand, within MPMX19_06128 at 315.869 kb on - strand, within MPMX19_06128 at 316.006 kb on + strand, within MPMX19_06128 at 316.006 kb on + strand, within MPMX19_06128 at 316.007 kb on - strand, within MPMX19_06128 at 316.018 kb on + strand, within MPMX19_06128 at 316.018 kb on + strand, within MPMX19_06128 at 316.018 kb on + strand, within MPMX19_06128 at 316.018 kb on + strand, within MPMX19_06128 at 316.018 kb on + strand, within MPMX19_06128 at 316.019 kb on - strand, within MPMX19_06128 at 316.019 kb on - strand, within MPMX19_06128 at 316.312 kb on + strand, within MPMX19_06128 at 316.312 kb on + strand, within MPMX19_06128 at 316.312 kb on + strand, within MPMX19_06128 at 316.312 kb on + strand, within MPMX19_06128 at 316.312 kb on + strand, within MPMX19_06128 at 316.313 kb on - strand, within MPMX19_06128 at 316.313 kb on - strand, within MPMX19_06128 at 316.313 kb on - strand, within MPMX19_06128 at 316.337 kb on - strand, within MPMX19_06128 at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.715 kb on + strand at 316.715 kb on + strand at 316.715 kb on + strand at 316.715 kb on + strand at 316.715 kb on + strand at 316.716 kb on - strand at 316.716 kb on - strand at 316.716 kb on - strand at 316.716 kb on - strand at 316.716 kb on - strand at 317.079 kb on + strand, within MPMX19_06129 at 317.079 kb on + strand, within MPMX19_06129 at 317.079 kb on + strand, within MPMX19_06129 at 317.079 kb on + strand, within MPMX19_06129 at 317.079 kb on + strand, within MPMX19_06129 at 317.080 kb on - strand, within MPMX19_06129 at 317.080 kb on - strand, within MPMX19_06129 at 317.080 kb on - strand, within MPMX19_06129 at 317.080 kb on - strand, within MPMX19_06129 at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.288 kb on + strand at 317.288 kb on + strand at 317.288 kb on + strand at 317.288 kb on + strand at 317.288 kb on + strand at 317.288 kb on + strand at 317.289 kb on - strand at 317.289 kb on - strand at 317.289 kb on - strand at 317.289 kb on - strand at 317.300 kb on + strand at 317.300 kb on + strand at 317.301 kb on - strand at 317.312 kb on + strand at 317.315 kb on + strand at 317.316 kb on - strand at 317.316 kb on - strand at 317.318 kb on + strand at 317.319 kb on - strand at 317.319 kb on - strand at 317.582 kb on + strand, within MPMX19_06130 at 317.603 kb on + strand, within MPMX19_06130 at 317.603 kb on + strand, within MPMX19_06130 at 317.604 kb on - strand, within MPMX19_06130 at 317.606 kb on + strand, within MPMX19_06130 at 317.606 kb on + strand, within MPMX19_06130 at 317.606 kb on + strand, within MPMX19_06130 at 317.606 kb on + strand, within MPMX19_06130 at 317.606 kb on + strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; spin-x control remove 315,745 + MPMX19_06128 0.66 -0.7 315,832 + MPMX19_06128 0.69 -0.9 315,833 - MPMX19_06128 0.69 -0.2 315,833 - MPMX19_06128 0.69 -1.3 315,868 + MPMX19_06128 0.70 -0.4 315,868 + MPMX19_06128 0.70 +0.4 315,868 + MPMX19_06128 0.70 +0.5 315,868 + MPMX19_06128 0.70 -0.8 315,868 + MPMX19_06128 0.70 -1.4 315,869 - MPMX19_06128 0.71 +0.2 315,869 - MPMX19_06128 0.71 +0.9 315,869 - MPMX19_06128 0.71 -2.0 315,869 - MPMX19_06128 0.71 +0.1 315,869 - MPMX19_06128 0.71 +0.8 315,869 - MPMX19_06128 0.71 -0.9 315,869 - MPMX19_06128 0.71 -1.0 315,869 - MPMX19_06128 0.71 +0.7 315,869 - MPMX19_06128 0.71 -0.4 316,006 + MPMX19_06128 0.75 +1.7 316,006 + MPMX19_06128 0.75 -1.3 316,007 - MPMX19_06128 0.75 -0.7 316,018 + MPMX19_06128 0.76 -0.3 316,018 + MPMX19_06128 0.76 -0.3 316,018 + MPMX19_06128 0.76 -0.6 316,018 + MPMX19_06128 0.76 +1.2 316,018 + MPMX19_06128 0.76 +0.8 316,019 - MPMX19_06128 0.76 -0.4 316,019 - MPMX19_06128 0.76 +1.1 316,312 + MPMX19_06128 0.86 -0.6 316,312 + MPMX19_06128 0.86 -1.9 316,312 + MPMX19_06128 0.86 +0.7 316,312 + MPMX19_06128 0.86 -1.6 316,312 + MPMX19_06128 0.86 +0.4 316,313 - MPMX19_06128 0.86 -0.7 316,313 - MPMX19_06128 0.86 +0.5 316,313 - MPMX19_06128 0.86 -1.5 316,337 - MPMX19_06128 0.87 -0.1 316,441 + -1.6 316,441 + +1.0 316,441 + +0.3 316,441 + -1.5 316,441 + -0.9 316,441 + +0.2 316,441 + +0.7 316,441 + +0.4 316,441 + +0.1 316,441 + +0.9 316,442 - -0.1 316,442 - -0.1 316,442 - -0.2 316,442 - +0.3 316,442 - +0.2 316,442 - -0.6 316,442 - -1.3 316,442 - +1.3 316,442 - +0.4 316,442 - -1.5 316,442 - -0.8 316,442 - +0.3 316,715 + +1.2 316,715 + -0.9 316,715 + +2.5 316,715 + +0.9 316,715 + -1.7 316,716 - -0.1 316,716 - -2.3 316,716 - -0.6 316,716 - -0.6 316,716 - -0.1 317,079 + MPMX19_06129 0.74 -0.9 317,079 + MPMX19_06129 0.74 -0.8 317,079 + MPMX19_06129 0.74 -0.3 317,079 + MPMX19_06129 0.74 -1.5 317,079 + MPMX19_06129 0.74 -0.5 317,080 - MPMX19_06129 0.74 +0.9 317,080 - MPMX19_06129 0.74 -0.9 317,080 - MPMX19_06129 0.74 -0.6 317,080 - MPMX19_06129 0.74 -1.2 317,203 + -1.5 317,203 + -0.3 317,203 + +0.4 317,203 + +0.2 317,203 + +0.7 317,203 + +0.1 317,203 + -1.9 317,203 + -0.9 317,203 + -0.8 317,203 + -0.9 317,203 + -0.4 317,203 + +1.5 317,203 + -0.0 317,203 + +0.5 317,203 + -0.4 317,203 + -0.7 317,203 + -0.4 317,204 - -0.9 317,204 - -0.3 317,204 - -0.4 317,204 - -2.1 317,204 - -0.3 317,204 - -1.1 317,204 - -0.4 317,204 - -0.9 317,204 - +0.5 317,204 - -0.1 317,288 + -0.1 317,288 + +1.0 317,288 + +0.5 317,288 + +1.6 317,288 + -0.7 317,288 + +0.3 317,289 - +0.6 317,289 - +0.3 317,289 - +0.1 317,289 - -0.1 317,300 + -0.6 317,300 + -0.5 317,301 - -1.0 317,312 + -0.2 317,315 + -1.7 317,316 - +0.7 317,316 - -1.0 317,318 + -0.5 317,319 - -1.5 317,319 - +0.6 317,582 + MPMX19_06130 0.13 -0.9 317,603 + MPMX19_06130 0.14 -1.5 317,603 + MPMX19_06130 0.14 -1.4 317,604 - MPMX19_06130 0.14 +0.9 317,606 + MPMX19_06130 0.14 +0.2 317,606 + MPMX19_06130 0.14 +0.0 317,606 + MPMX19_06130 0.14 -2.4 317,606 + MPMX19_06130 0.14 -0.7 317,606 + MPMX19_06130 0.14 +0.1 317,607 - MPMX19_06130 0.14 +0.5 317,607 - MPMX19_06130 0.14 +0.7 317,607 - MPMX19_06130 0.14 -1.8 317,607 - MPMX19_06130 0.14 -0.2 317,607 - MPMX19_06130 0.14 +0.7 317,607 - MPMX19_06130 0.14 -0.8 317,607 - MPMX19_06130 0.14 +0.4
Or see this region's nucleotide sequence