Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01886

Experiment: NL-CCM; spin-x control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; spin-x control
1,966,960	-		MPMX19_01885	0.56	+1.3
1,967,101	+		MPMX19_01885	0.67	-0.9
1,967,101	+		MPMX19_01885	0.67	-0.6
1,967,101	+		MPMX19_01885	0.67	-0.5
1,967,101	+		MPMX19_01885	0.67	-2.5
1,967,101	+		MPMX19_01885	0.67	-1.1
1,967,102	-		MPMX19_01885	0.67	-1.6
1,967,102	-		MPMX19_01885	0.67	+0.2
1,967,233	+		MPMX19_01885	0.78	-0.3
1,967,233	+		MPMX19_01885	0.78	-1.7
1,967,233	+		MPMX19_01885	0.78	+0.4
1,967,233	+		MPMX19_01885	0.78	-0.5
1,967,234	-		MPMX19_01885	0.78	-0.6
1,967,234	-		MPMX19_01885	0.78	-0.0
1,967,234	-		MPMX19_01885	0.78	-0.2
1,967,234	-		MPMX19_01885	0.78	+0.3
1,967,234	-		MPMX19_01885	0.78	-0.3
1,967,239	+		MPMX19_01885	0.78	-0.6
1,967,239	+		MPMX19_01885	0.78	-1.4
1,967,239	+		MPMX19_01885	0.78	+0.4
1,967,239	+		MPMX19_01885	0.78	+0.0
1,967,239	+		MPMX19_01885	0.78	-0.9
1,967,240	-		MPMX19_01885	0.78	-0.4
1,967,240	-		MPMX19_01885	0.78	-1.6
1,967,240	-		MPMX19_01885	0.78	+1.2
1,967,240	-		MPMX19_01885	0.78	-1.5
1,967,240	-		MPMX19_01885	0.78	+0.9
1,967,240	-		MPMX19_01885	0.78	-1.8
1,967,240	-		MPMX19_01885	0.78	-2.2
1,967,306	-		MPMX19_01885	0.84	+0.4
1,967,306	-		MPMX19_01885	0.84	+0.9
1,967,306	-		MPMX19_01885	0.84	+0.3
1,967,317	+		MPMX19_01885	0.85	+0.6
1,967,318	-		MPMX19_01885	0.85	-0.6
1,967,318	-		MPMX19_01885	0.85	+0.3
1,967,332	+		MPMX19_01885	0.86	+0.2
1,967,332	+		MPMX19_01885	0.86	-1.2
1,967,332	+		MPMX19_01885	0.86	+0.1
1,967,332	+		MPMX19_01885	0.86	-2.1
1,967,332	+		MPMX19_01885	0.86	+1.4
1,967,332	+		MPMX19_01885	0.86	-1.3
1,967,333	-		MPMX19_01885	0.86	-1.2
1,967,333	-		MPMX19_01885	0.86	-2.7
1,967,333	-		MPMX19_01885	0.86	-0.9
1,967,393	+				+0.4
1,967,393	+				-0.6
1,967,393	+				-0.7
1,967,394	-				-0.4
1,967,565	+				-0.9
1,967,709	+				+0.2
1,967,710	-				-0.4
1,967,710	-				-0.7
1,967,710	-				-0.8
1,967,732	+				-0.6
1,967,732	+				-0.5
1,967,732	+				-0.1
1,967,732	+				-0.3
1,967,732	+				-0.2
1,967,732	+				-1.4
1,967,732	+				+0.7
1,967,732	+				-1.6
1,967,732	+				-0.9
1,967,733	-				-0.2
1,967,733	-				+0.1
1,967,733	-				-0.1
1,967,733	-				-0.3
1,967,733	-				-2.8
1,967,733	-				-0.1
1,967,733	-				-0.3
1,967,733	-				+0.2
1,967,733	-				-1.0
1,967,870	+		MPMX19_01886	0.10	-2.4
1,967,870	+		MPMX19_01886	0.10	-0.2
1,967,870	+		MPMX19_01886	0.10	-1.4
1,967,871	-		MPMX19_01886	0.10	-0.0
1,967,871	-		MPMX19_01886	0.10	+0.2
1,967,871	-		MPMX19_01886	0.10	+1.0
1,967,871	-		MPMX19_01886	0.10	+0.6
1,967,871	-		MPMX19_01886	0.10	-1.6
1,967,871	-		MPMX19_01886	0.10	+0.8
1,967,918	+		MPMX19_01886	0.14	-0.4
1,967,918	+		MPMX19_01886	0.14	+1.2
1,967,919	-		MPMX19_01886	0.14	-1.4
1,967,919	-		MPMX19_01886	0.14	-1.3
1,967,966	+		MPMX19_01886	0.17	-0.5
1,967,966	+		MPMX19_01886	0.17	+0.1
1,967,966	+		MPMX19_01886	0.17	-0.8
1,967,966	+		MPMX19_01886	0.17	-0.4
1,967,966	+		MPMX19_01886	0.17	-1.6
1,967,966	+		MPMX19_01886	0.17	+0.9
1,967,966	+		MPMX19_01886	0.17	-0.5
1,967,966	+		MPMX19_01886	0.17	-1.1
1,967,966	+		MPMX19_01886	0.17	+0.9
1,967,967	-		MPMX19_01886	0.17	-0.8
1,967,967	-		MPMX19_01886	0.17	+0.5
1,967,967	-		MPMX19_01886	0.17	-2.1
1,967,967	-		MPMX19_01886	0.17	-0.5
1,967,967	-		MPMX19_01886	0.17	-0.3
1,967,967	-		MPMX19_01886	0.17	+0.4
1,967,967	-		MPMX19_01886	0.17	-0.9
1,967,967	-		MPMX19_01886	0.17	+1.1
1,967,967	-		MPMX19_01886	0.17	+0.5
1,968,026	+		MPMX19_01886	0.22	+0.5
1,968,026	+		MPMX19_01886	0.22	+0.0
1,968,026	+		MPMX19_01886	0.22	-0.7
1,968,026	+		MPMX19_01886	0.22	+0.6
1,968,026	+		MPMX19_01886	0.22	-1.1
1,968,026	+		MPMX19_01886	0.22	-0.3
1,968,026	+		MPMX19_01886	0.22	-0.5
1,968,026	+		MPMX19_01886	0.22	-2.0
1,968,027	-		MPMX19_01886	0.22	+0.2
1,968,027	-		MPMX19_01886	0.22	-2.3
1,968,027	-		MPMX19_01886	0.22	-0.2
1,968,027	-		MPMX19_01886	0.22	-0.5
1,968,027	-		MPMX19_01886	0.22	-0.6
1,968,027	-		MPMX19_01886	0.22	+1.3
1,968,027	-		MPMX19_01886	0.22	-1.2
1,968,027	-		MPMX19_01886	0.22	-1.9
1,968,027	-		MPMX19_01886	0.22	-1.5
1,968,027	-		MPMX19_01886	0.22	-0.5
1,968,027	-		MPMX19_01886	0.22	-1.3
1,968,473	+		MPMX19_01886	0.54	-1.1
1,968,473	+		MPMX19_01886	0.54	-0.9
1,968,473	+		MPMX19_01886	0.54	-0.1
1,968,473	+		MPMX19_01886	0.54	-0.8
1,968,473	+		MPMX19_01886	0.54	+0.1
1,968,474	-		MPMX19_01886	0.54	-0.4
1,968,474	-		MPMX19_01886	0.54	+0.4
1,968,474	-		MPMX19_01886	0.54	-1.3
1,968,474	-		MPMX19_01886	0.54	-0.8
1,968,474	-		MPMX19_01886	0.54	+1.5
1,968,488	+		MPMX19_01886	0.55	-1.4
1,968,488	+		MPMX19_01886	0.55	-1.7
1,968,489	-		MPMX19_01886	0.55	-0.3
1,968,489	-		MPMX19_01886	0.55	-2.2
1,968,489	-		MPMX19_01886	0.55	-0.8
1,968,494	+		MPMX19_01886	0.56	+0.4
1,968,494	+		MPMX19_01886	0.56	-0.6
1,968,494	+		MPMX19_01886	0.56	+0.2
1,968,494	+		MPMX19_01886	0.56	-1.8
1,968,494	+		MPMX19_01886	0.56	-0.4
1,968,494	+		MPMX19_01886	0.56	+0.2
1,968,494	+		MPMX19_01886	0.56	-0.0
1,968,495	-		MPMX19_01886	0.56	-0.3
1,968,495	-		MPMX19_01886	0.56	+2.1
1,968,495	-		MPMX19_01886	0.56	+0.1
1,968,495	-		MPMX19_01886	0.56	-1.2
1,968,563	+		MPMX19_01886	0.61	-1.8
1,968,563	+		MPMX19_01886	0.61	+0.0
1,968,563	+		MPMX19_01886	0.61	-0.5
1,968,563	+		MPMX19_01886	0.61	-0.5
1,968,564	-		MPMX19_01886	0.61	-0.3
1,968,564	-		MPMX19_01886	0.61	-0.2
1,968,564	-		MPMX19_01886	0.61	-0.2
1,968,564	-		MPMX19_01886	0.61	-0.6
1,968,564	-		MPMX19_01886	0.61	-0.9
1,968,564	-		MPMX19_01886	0.61	-0.4
1,968,564	-		MPMX19_01886	0.61	-0.4
1,968,564	-		MPMX19_01886	0.61	-2.1
1,968,564	-		MPMX19_01886	0.61	+0.3
1,968,564	-		MPMX19_01886	0.61	-1.0
1,969,131	+				-0.2
1,969,132	-				-0.7
1,969,132	-				+0.5
1,969,132	-				-0.4
1,969,132	-				-1.1
1,969,204	-				-1.5
1,969,439	+		MPMX19_01887	0.50	-0.8
1,969,439	+		MPMX19_01887	0.50	-0.3
1,969,439	+		MPMX19_01887	0.50	-0.6
1,969,439	+		MPMX19_01887	0.50	-1.2
1,969,439	+		MPMX19_01887	0.50	-0.3
1,969,439	+		MPMX19_01887	0.50	-0.7
1,969,439	+		MPMX19_01887	0.50	-0.7
1,969,439	+		MPMX19_01887	0.50	-0.2
1,969,439	+		MPMX19_01887	0.50	+0.3
1,969,439	+		MPMX19_01887	0.50	-0.5
1,969,439	+		MPMX19_01887	0.50	-1.7
1,969,439	+		MPMX19_01887	0.50	+0.4
1,969,439	+		MPMX19_01887	0.50	-0.9
1,969,439	+		MPMX19_01887	0.50	-2.7
1,969,440	-		MPMX19_01887	0.50	-1.2
1,969,440	-		MPMX19_01887	0.50	-0.1
1,969,440	-		MPMX19_01887	0.50	-1.0
1,969,440	-		MPMX19_01887	0.50	-1.4
1,969,440	-		MPMX19_01887	0.50	-0.1
1,969,440	-		MPMX19_01887	0.50	-0.2
1,969,440	-		MPMX19_01887	0.50	-0.4
1,969,440	-		MPMX19_01887	0.50	-0.5
1,969,440	-		MPMX19_01887	0.50	+1.0
1,969,493	+		MPMX19_01887	0.63	-0.7
1,969,493	+		MPMX19_01887	0.63	-0.1
1,969,493	+		MPMX19_01887	0.63	+0.7
1,969,493	+		MPMX19_01887	0.63	-1.0
1,969,493	+		MPMX19_01887	0.63	-0.2
1,969,493	+		MPMX19_01887	0.63	+0.6
1,969,493	+		MPMX19_01887	0.63	-0.3
1,969,493	+		MPMX19_01887	0.63	+0.4
1,969,493	+		MPMX19_01887	0.63	-1.5
1,969,493	+		MPMX19_01887	0.63	+0.5
1,969,494	-		MPMX19_01887	0.63	-0.2
1,969,494	-		MPMX19_01887	0.63	+0.1
1,969,494	-		MPMX19_01887	0.63	+0.1
1,969,494	-		MPMX19_01887	0.63	+1.2
1,969,511	+		MPMX19_01887	0.67	-1.6
1,969,511	+		MPMX19_01887	0.67	+1.1
1,969,529	+		MPMX19_01887	0.71	+0.6
1,969,529	+		MPMX19_01887	0.71	+0.1
1,969,530	-		MPMX19_01887	0.71	-0.6
1,969,530	-		MPMX19_01887	0.71	-0.1
1,969,628	+				+0.9
1,969,628	+				-0.0
1,969,628	+				+0.6
1,969,628	+				-0.9
1,969,629	-				+0.7
1,969,629	-				-0.2
1,969,629	-				+0.3
1,969,629	-				-0.6
1,969,629	-				-0.8
1,969,629	-				-0.1
1,969,629	-				+0.4
1,969,714	+				-1.0
1,969,714	+				+0.7
1,969,715	-				-1.3
1,969,715	-				+0.1
1,969,715	-				-0.3
1,969,779	+				-1.8
1,969,780	-				-0.0
1,969,780	-				-0.0
1,969,780	-				+1.8
1,969,830	+				-0.3
1,969,830	+				+0.7
1,969,830	+				-0.2
1,969,830	+				+1.4
1,969,830	+				-1.9
1,969,830	+				-0.9
1,969,830	+				-0.9
1,969,831	-				-1.7
1,969,831	-				-1.1
1,969,831	-				-0.7