Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF971 and GFF972 are separated by 10 nucleotides GFF972 and GFF973 overlap by 4 nucleotides GFF973 and GFF974 are separated by 31 nucleotides GFF974 and GFF975 are separated by 3 nucleotides
GFF971 - Heme exporter protein C, at 1,049,990 to 1,050,721
GFF971
GFF972 - hypothetical protein, at 1,050,732 to 1,050,902
GFF972
GFF973 - Thiol:disulfide interchange protein CycY, at 1,050,899 to 1,051,495
GFF973
GFF974 - putative adenylyltransferase/sulfurtransferase MoeZ, at 1,051,527 to 1,052,345
GFF974
GFF975 - hypothetical protein, at 1,052,349 to 1,053,308
GFF975
Position (kb)
1050
1051
1052 Strain fitness (log2 ratio)
-1
0
1 at 1049.978 kb on + strand at 1049.978 kb on + strand at 1051.523 kb on - strand at 1052.325 kb on - strand at 1052.382 kb on + strand at 1052.383 kb on - strand at 1052.383 kb on - strand at 1052.384 kb on + strand at 1052.384 kb on + strand at 1052.384 kb on + strand at 1052.384 kb on + strand at 1052.384 kb on + strand at 1052.385 kb on - strand at 1052.385 kb on - strand at 1052.385 kb on - strand at 1052.385 kb on - strand at 1052.385 kb on - strand at 1052.385 kb on - strand at 1052.385 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 1,049,978 + +0.1 1,049,978 + -0.6 1,051,523 - +0.8 1,052,325 - +0.2 1,052,382 + -0.5 1,052,383 - +0.3 1,052,383 - -0.1 1,052,384 + -0.3 1,052,384 + -0.6 1,052,384 + +0.6 1,052,384 + -1.0 1,052,384 + +0.9 1,052,385 - +1.4 1,052,385 - +0.0 1,052,385 - -0.5 1,052,385 - -0.1 1,052,385 - +0.7 1,052,385 - -0.0 1,052,385 - -0.2
Or see this region's nucleotide sequence