Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF765 and GFF766 are separated by 4 nucleotides GFF766 and GFF767 are separated by 217 nucleotides GFF767 and GFF768 are separated by 42 nucleotides
GFF765 - Thiosulfate sulfurtransferase GlpE, at 817,196 to 818,818
GFF765
GFF766 - 3-mercaptopropionate dioxygenase, at 818,823 to 819,461
GFF766
GFF767 - Putative aliphatic sulfonates-binding protein, at 819,679 to 820,683
GFF767
GFF768 - Nitrilotriacetate monooxygenase component A, at 820,726 to 822,057
GFF768
Position (kb) 819
820
821 Strain fitness (log2 ratio) -2
-1
0
1
2 at 818.811 kb on + strand at 818.811 kb on + strand at 818.811 kb on + strand at 818.882 kb on + strand at 818.882 kb on + strand at 818.882 kb on + strand at 818.883 kb on - strand at 818.923 kb on + strand, within GFF766 at 818.924 kb on - strand, within GFF766 at 818.924 kb on - strand, within GFF766 at 818.960 kb on - strand, within GFF766 at 819.256 kb on + strand, within GFF766 at 819.257 kb on - strand, within GFF766 at 819.257 kb on - strand, within GFF766 at 819.259 kb on + strand, within GFF766 at 819.260 kb on - strand, within GFF766 at 819.260 kb on - strand, within GFF766 at 819.260 kb on - strand, within GFF766 at 819.280 kb on + strand, within GFF766 at 820.037 kb on - strand, within GFF767 at 820.037 kb on - strand, within GFF767 at 820.037 kb on - strand, within GFF767 at 820.037 kb on - strand, within GFF767 at 820.037 kb on - strand, within GFF767 at 820.037 kb on - strand, within GFF767 at 820.126 kb on - strand, within GFF767 at 820.126 kb on - strand, within GFF767 at 820.126 kb on - strand, within GFF767 at 820.162 kb on + strand, within GFF767 at 820.222 kb on + strand, within GFF767 at 820.222 kb on + strand, within GFF767 at 820.360 kb on + strand, within GFF767 at 820.360 kb on + strand, within GFF767 at 820.361 kb on - strand, within GFF767 at 820.361 kb on - strand, within GFF767 at 820.369 kb on + strand, within GFF767 at 820.369 kb on + strand, within GFF767 at 820.369 kb on + strand, within GFF767 at 820.370 kb on - strand, within GFF767 at 820.373 kb on - strand, within GFF767 at 820.549 kb on + strand, within GFF767 at 820.549 kb on + strand, within GFF767 at 820.549 kb on + strand, within GFF767 at 820.549 kb on + strand, within GFF767 at 820.549 kb on + strand, within GFF767 at 820.549 kb on + strand, within GFF767 at 820.549 kb on + strand, within GFF767 at 820.550 kb on - strand, within GFF767 at 820.782 kb on + strand at 820.782 kb on + strand at 820.783 kb on - strand at 820.783 kb on - strand at 820.947 kb on + strand, within GFF768 at 820.947 kb on + strand, within GFF768 at 821.023 kb on - strand, within GFF768 at 821.085 kb on + strand, within GFF768 at 821.085 kb on + strand, within GFF768 at 821.085 kb on + strand, within GFF768 at 821.085 kb on + strand, within GFF768 at 821.086 kb on - strand, within GFF768 at 821.086 kb on - strand, within GFF768 at 821.086 kb on - strand, within GFF768 at 821.086 kb on - strand, within GFF768 at 821.086 kb on - strand, within GFF768 at 821.127 kb on + strand, within GFF768 at 821.206 kb on + strand, within GFF768 at 821.206 kb on + strand, within GFF768 at 821.206 kb on + strand, within GFF768 at 821.207 kb on - strand, within GFF768 at 821.279 kb on - strand, within GFF768 at 821.279 kb on - strand, within GFF768 at 821.483 kb on - strand, within GFF768
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 818,811 + -0.7 818,811 + +0.1 818,811 + -0.3 818,882 + -0.5 818,882 + +0.0 818,882 + -0.1 818,883 - +1.8 818,923 + GFF766 0.16 +1.0 818,924 - GFF766 0.16 -0.2 818,924 - GFF766 0.16 -0.2 818,960 - GFF766 0.21 -0.3 819,256 + GFF766 0.68 -1.1 819,257 - GFF766 0.68 -0.7 819,257 - GFF766 0.68 +0.4 819,259 + GFF766 0.68 +1.4 819,260 - GFF766 0.68 -0.5 819,260 - GFF766 0.68 +0.5 819,260 - GFF766 0.68 -0.9 819,280 + GFF766 0.72 -0.7 820,037 - GFF767 0.36 +1.3 820,037 - GFF767 0.36 +0.6 820,037 - GFF767 0.36 -0.0 820,037 - GFF767 0.36 -0.4 820,037 - GFF767 0.36 -0.8 820,037 - GFF767 0.36 +0.1 820,126 - GFF767 0.44 +1.0 820,126 - GFF767 0.44 -0.2 820,126 - GFF767 0.44 -0.2 820,162 + GFF767 0.48 +1.2 820,222 + GFF767 0.54 +0.5 820,222 + GFF767 0.54 -0.0 820,360 + GFF767 0.68 +0.2 820,360 + GFF767 0.68 -0.6 820,361 - GFF767 0.68 +0.0 820,361 - GFF767 0.68 -0.4 820,369 + GFF767 0.69 -1.5 820,369 + GFF767 0.69 -0.3 820,369 + GFF767 0.69 +0.2 820,370 - GFF767 0.69 -0.2 820,373 - GFF767 0.69 -1.2 820,549 + GFF767 0.87 +0.5 820,549 + GFF767 0.87 -1.7 820,549 + GFF767 0.87 -2.4 820,549 + GFF767 0.87 -0.5 820,549 + GFF767 0.87 -1.5 820,549 + GFF767 0.87 -0.4 820,549 + GFF767 0.87 -1.4 820,550 - GFF767 0.87 +0.7 820,782 + -0.6 820,782 + -0.4 820,783 - +0.1 820,783 - +0.5 820,947 + GFF768 0.17 +0.6 820,947 + GFF768 0.17 -0.9 821,023 - GFF768 0.22 -0.0 821,085 + GFF768 0.27 +0.4 821,085 + GFF768 0.27 +0.7 821,085 + GFF768 0.27 +0.3 821,085 + GFF768 0.27 -0.3 821,086 - GFF768 0.27 -0.6 821,086 - GFF768 0.27 -0.8 821,086 - GFF768 0.27 +0.7 821,086 - GFF768 0.27 +0.8 821,086 - GFF768 0.27 -0.7 821,127 + GFF768 0.30 +0.4 821,206 + GFF768 0.36 +0.0 821,206 + GFF768 0.36 -0.2 821,206 + GFF768 0.36 -0.2 821,207 - GFF768 0.36 +0.1 821,279 - GFF768 0.42 -0.5 821,279 - GFF768 0.42 +0.6 821,483 - GFF768 0.57 +0.0
Or see this region's nucleotide sequence