Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF701 and GFF702 are separated by 144 nucleotides GFF702 and GFF703 are separated by 124 nucleotides GFF703 and GFF704 are separated by 83 nucleotides GFF704 and GFF705 are separated by 90 nucleotides
GFF701 - Heme A synthase, at 749,518 to 750,594
GFF701
GFF702 - hypothetical protein, at 750,739 to 750,951
GFF702
GFF703 - hypothetical protein, at 751,076 to 752,545
GFF703
GFF704 - Short-chain-enoyl-CoA hydratase, at 752,629 to 753,453
GFF704
GFF705 - hypothetical protein, at 753,544 to 753,999
GFF705
Position (kb) 751
752
753 Strain fitness (log2 ratio) -1
0
1 at 750.096 kb on - strand, within GFF701 at 750.096 kb on - strand, within GFF701 at 750.302 kb on + strand, within GFF701 at 750.303 kb on - strand, within GFF701 at 750.518 kb on + strand at 750.518 kb on + strand at 750.519 kb on - strand at 750.654 kb on - strand at 750.871 kb on + strand, within GFF702 at 750.871 kb on + strand, within GFF702 at 750.872 kb on - strand, within GFF702 at 750.872 kb on - strand, within GFF702 at 751.368 kb on + strand, within GFF703 at 751.369 kb on - strand, within GFF703 at 751.374 kb on + strand, within GFF703 at 751.374 kb on + strand, within GFF703 at 751.374 kb on + strand, within GFF703 at 751.375 kb on - strand, within GFF703 at 751.375 kb on - strand, within GFF703 at 751.643 kb on + strand, within GFF703 at 751.643 kb on + strand, within GFF703 at 752.002 kb on - strand, within GFF703 at 752.037 kb on - strand, within GFF703 at 752.053 kb on - strand, within GFF703 at 752.053 kb on - strand, within GFF703 at 752.053 kb on - strand, within GFF703 at 752.053 kb on - strand, within GFF703 at 752.053 kb on - strand, within GFF703 at 752.621 kb on - strand at 752.630 kb on + strand at 752.631 kb on - strand at 752.676 kb on + strand at 752.729 kb on + strand, within GFF704 at 752.736 kb on - strand, within GFF704 at 752.736 kb on - strand, within GFF704 at 752.768 kb on + strand, within GFF704 at 752.768 kb on + strand, within GFF704 at 753.000 kb on + strand, within GFF704 at 753.177 kb on - strand, within GFF704 at 753.501 kb on - strand at 753.501 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 750,096 - GFF701 0.54 -1.5 750,096 - GFF701 0.54 +1.1 750,302 + GFF701 0.73 -0.8 750,303 - GFF701 0.73 -0.3 750,518 + +0.8 750,518 + +1.5 750,519 - +0.9 750,654 - -0.8 750,871 + GFF702 0.62 -0.1 750,871 + GFF702 0.62 +0.3 750,872 - GFF702 0.62 -0.5 750,872 - GFF702 0.62 -0.6 751,368 + GFF703 0.20 +0.5 751,369 - GFF703 0.20 -0.6 751,374 + GFF703 0.20 +0.1 751,374 + GFF703 0.20 +0.7 751,374 + GFF703 0.20 +1.6 751,375 - GFF703 0.20 -0.3 751,375 - GFF703 0.20 +0.5 751,643 + GFF703 0.39 -1.2 751,643 + GFF703 0.39 -0.7 752,002 - GFF703 0.63 +0.2 752,037 - GFF703 0.65 +0.0 752,053 - GFF703 0.66 -0.4 752,053 - GFF703 0.66 -0.4 752,053 - GFF703 0.66 +0.1 752,053 - GFF703 0.66 -0.1 752,053 - GFF703 0.66 -0.5 752,621 - +0.2 752,630 + -0.0 752,631 - +0.8 752,676 + -1.4 752,729 + GFF704 0.12 +0.2 752,736 - GFF704 0.13 -0.7 752,736 - GFF704 0.13 +0.2 752,768 + GFF704 0.17 +0.1 752,768 + GFF704 0.17 -0.1 753,000 + GFF704 0.45 +0.4 753,177 - GFF704 0.66 +0.3 753,501 - +0.2 753,501 - -0.7
Or see this region's nucleotide sequence