Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF641 and GFF642 are separated by 190 nucleotides GFF642 and GFF643 are separated by 152 nucleotides GFF643 and GFF644 are separated by 61 nucleotides
GFF641 - hypothetical protein, at 684,465 to 687,962
GFF641
GFF642 - K(+)-insensitive pyrophosphate-energized proton pump, at 688,153 to 690,294
GFF642
GFF643 - hypothetical protein, at 690,447 to 691,019
GFF643
GFF644 - Adenine permease AdeP, at 691,081 to 692,379
GFF644
Position (kb) 688
689
690
691 Strain fitness (log2 ratio) -1
0
1
2 at 688.114 kb on + strand at 688.115 kb on - strand at 688.121 kb on - strand at 688.136 kb on + strand at 688.150 kb on + strand at 688.151 kb on - strand at 688.297 kb on + strand at 688.298 kb on - strand at 688.312 kb on + strand at 688.576 kb on + strand, within GFF642 at 688.990 kb on + strand, within GFF642 at 688.991 kb on - strand, within GFF642 at 688.991 kb on - strand, within GFF642 at 688.991 kb on - strand, within GFF642 at 689.131 kb on + strand, within GFF642 at 689.206 kb on + strand, within GFF642 at 689.206 kb on + strand, within GFF642 at 689.206 kb on + strand, within GFF642 at 689.206 kb on + strand, within GFF642 at 689.207 kb on - strand, within GFF642 at 689.210 kb on - strand, within GFF642 at 689.210 kb on - strand, within GFF642 at 689.210 kb on - strand, within GFF642 at 689.660 kb on - strand, within GFF642 at 689.701 kb on + strand, within GFF642 at 689.702 kb on - strand, within GFF642 at 689.702 kb on - strand, within GFF642 at 689.702 kb on - strand, within GFF642 at 689.740 kb on + strand, within GFF642 at 689.741 kb on - strand, within GFF642 at 689.963 kb on - strand, within GFF642 at 690.205 kb on + strand at 690.206 kb on - strand at 690.387 kb on + strand at 690.421 kb on - strand at 690.591 kb on + strand, within GFF643 at 690.880 kb on - strand, within GFF643 at 690.880 kb on - strand, within GFF643 at 691.180 kb on + strand at 691.180 kb on + strand at 691.181 kb on - strand at 691.182 kb on + strand at 691.183 kb on - strand at 691.183 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 688,114 + -1.1 688,115 - +0.9 688,121 - +0.4 688,136 + -0.7 688,150 + +1.0 688,151 - +0.1 688,297 + -0.6 688,298 - -0.2 688,312 + +0.6 688,576 + GFF642 0.20 +1.1 688,990 + GFF642 0.39 +0.0 688,991 - GFF642 0.39 +0.1 688,991 - GFF642 0.39 +0.2 688,991 - GFF642 0.39 +0.8 689,131 + GFF642 0.46 +0.6 689,206 + GFF642 0.49 -0.0 689,206 + GFF642 0.49 -1.1 689,206 + GFF642 0.49 +0.2 689,206 + GFF642 0.49 -0.5 689,207 - GFF642 0.49 -0.2 689,210 - GFF642 0.49 -0.7 689,210 - GFF642 0.49 +0.1 689,210 - GFF642 0.49 +0.2 689,660 - GFF642 0.70 +0.4 689,701 + GFF642 0.72 +0.4 689,702 - GFF642 0.72 -0.1 689,702 - GFF642 0.72 +0.5 689,702 - GFF642 0.72 +0.2 689,740 + GFF642 0.74 +0.5 689,741 - GFF642 0.74 -0.4 689,963 - GFF642 0.85 -0.3 690,205 + +0.2 690,206 - +0.3 690,387 + -0.2 690,421 - -0.9 690,591 + GFF643 0.25 +0.5 690,880 - GFF643 0.76 +1.8 690,880 - GFF643 0.76 +0.2 691,180 + +0.1 691,180 + -0.4 691,181 - -0.7 691,182 + +0.1 691,183 - +0.2 691,183 - -0.2
Or see this region's nucleotide sequence