Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF520 and GFF521 are separated by 186 nucleotides GFF521 and GFF522 are separated by 333 nucleotides
GFF520 - Long-chain fatty acid transport protein, at 557,035 to 558,387
GFF520
GFF521 - Long-chain-fatty-acid--CoA ligase, at 558,574 to 560,226
GFF521
GFF522 - 30S ribosomal protein S2, at 560,560 to 561,480
GFF522
Position (kb) 558
559
560
561 Strain fitness (log2 ratio) -2
-1
0
1
2 at 557.618 kb on - strand, within GFF520 at 557.680 kb on + strand, within GFF520 at 557.681 kb on - strand, within GFF520 at 557.770 kb on + strand, within GFF520 at 557.770 kb on + strand, within GFF520 at 557.771 kb on - strand, within GFF520 at 557.983 kb on + strand, within GFF520 at 557.984 kb on - strand, within GFF520 at 558.052 kb on + strand, within GFF520 at 558.052 kb on + strand, within GFF520 at 558.088 kb on - strand, within GFF520 at 558.094 kb on + strand, within GFF520 at 558.095 kb on - strand, within GFF520 at 558.178 kb on + strand, within GFF520 at 558.179 kb on - strand, within GFF520 at 558.215 kb on - strand, within GFF520 at 558.313 kb on + strand at 558.314 kb on - strand at 558.343 kb on + strand at 558.344 kb on - strand at 558.385 kb on + strand at 558.386 kb on - strand at 558.386 kb on - strand at 558.437 kb on + strand at 558.694 kb on + strand at 558.695 kb on - strand at 558.695 kb on - strand at 558.695 kb on - strand at 558.797 kb on - strand, within GFF521 at 559.069 kb on + strand, within GFF521 at 559.069 kb on + strand, within GFF521 at 559.069 kb on + strand, within GFF521 at 559.100 kb on - strand, within GFF521 at 559.100 kb on - strand, within GFF521 at 559.100 kb on - strand, within GFF521 at 559.177 kb on + strand, within GFF521 at 559.177 kb on + strand, within GFF521 at 559.177 kb on + strand, within GFF521 at 559.178 kb on - strand, within GFF521 at 559.178 kb on - strand, within GFF521 at 559.178 kb on - strand, within GFF521 at 559.179 kb on + strand, within GFF521 at 559.462 kb on + strand, within GFF521 at 559.463 kb on - strand, within GFF521 at 559.463 kb on - strand, within GFF521 at 559.463 kb on - strand, within GFF521 at 559.463 kb on - strand, within GFF521 at 559.471 kb on - strand, within GFF521 at 559.471 kb on - strand, within GFF521 at 559.603 kb on + strand, within GFF521 at 559.603 kb on + strand, within GFF521 at 559.603 kb on + strand, within GFF521 at 559.604 kb on - strand, within GFF521 at 559.879 kb on + strand, within GFF521 at 559.880 kb on - strand, within GFF521 at 559.929 kb on + strand, within GFF521 at 559.930 kb on - strand, within GFF521 at 559.930 kb on - strand, within GFF521 at 559.963 kb on + strand, within GFF521 at 559.964 kb on - strand, within GFF521 at 560.014 kb on + strand, within GFF521 at 560.269 kb on + strand at 560.271 kb on + strand at 560.351 kb on + strand at 560.369 kb on + strand at 561.184 kb on + strand, within GFF522 at 561.184 kb on + strand, within GFF522
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 557,618 - GFF520 0.43 -0.7 557,680 + GFF520 0.48 -0.1 557,681 - GFF520 0.48 +0.2 557,770 + GFF520 0.54 -0.2 557,770 + GFF520 0.54 -0.0 557,771 - GFF520 0.54 -0.3 557,983 + GFF520 0.70 +0.3 557,984 - GFF520 0.70 -0.7 558,052 + GFF520 0.75 -0.3 558,052 + GFF520 0.75 +2.1 558,088 - GFF520 0.78 -0.1 558,094 + GFF520 0.78 +0.8 558,095 - GFF520 0.78 +0.2 558,178 + GFF520 0.84 +0.2 558,179 - GFF520 0.85 +0.1 558,215 - GFF520 0.87 +1.8 558,313 + +0.6 558,314 - +0.4 558,343 + +0.1 558,344 - +0.2 558,385 + +1.8 558,386 - +0.2 558,386 - +0.3 558,437 + -1.0 558,694 + -1.0 558,695 - +0.2 558,695 - +0.1 558,695 - +0.4 558,797 - GFF521 0.13 -0.2 559,069 + GFF521 0.30 +1.1 559,069 + GFF521 0.30 +0.0 559,069 + GFF521 0.30 +0.5 559,100 - GFF521 0.32 -0.5 559,100 - GFF521 0.32 +0.3 559,100 - GFF521 0.32 -0.9 559,177 + GFF521 0.36 -0.0 559,177 + GFF521 0.36 +0.2 559,177 + GFF521 0.36 -0.8 559,178 - GFF521 0.37 -0.6 559,178 - GFF521 0.37 +0.4 559,178 - GFF521 0.37 -1.4 559,179 + GFF521 0.37 +0.2 559,462 + GFF521 0.54 -0.2 559,463 - GFF521 0.54 -0.5 559,463 - GFF521 0.54 -0.1 559,463 - GFF521 0.54 +0.2 559,463 - GFF521 0.54 +0.5 559,471 - GFF521 0.54 +1.2 559,471 - GFF521 0.54 +0.6 559,603 + GFF521 0.62 +0.3 559,603 + GFF521 0.62 +0.7 559,603 + GFF521 0.62 -2.5 559,604 - GFF521 0.62 -1.4 559,879 + GFF521 0.79 -1.5 559,880 - GFF521 0.79 +0.1 559,929 + GFF521 0.82 +0.2 559,930 - GFF521 0.82 -1.4 559,930 - GFF521 0.82 +0.9 559,963 + GFF521 0.84 -0.3 559,964 - GFF521 0.84 +1.0 560,014 + GFF521 0.87 -0.5 560,269 + -0.0 560,271 + -0.7 560,351 + -2.5 560,369 + +1.3 561,184 + GFF522 0.68 -0.0 561,184 + GFF522 0.68 -2.1
Or see this region's nucleotide sequence