Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF514 and GFF515 are separated by 35 nucleotides GFF515 and GFF516 are separated by 101 nucleotides
GFF514 - hypothetical protein, at 548,096 to 550,147
GFF514
GFF515 - hypothetical protein, at 550,183 to 550,494
GFF515
GFF516 - 3-methylmercaptopropionyl-CoA dehydrogenase, at 550,596 to 552,386
GFF516
Position (kb) 550
551 Strain fitness (log2 ratio) -2
-1
0
1
2 at 549.377 kb on + strand, within GFF514 at 549.377 kb on + strand, within GFF514 at 549.377 kb on + strand, within GFF514 at 549.377 kb on + strand, within GFF514 at 549.377 kb on + strand, within GFF514 at 549.377 kb on + strand, within GFF514 at 549.378 kb on - strand, within GFF514 at 549.378 kb on - strand, within GFF514 at 549.378 kb on - strand, within GFF514 at 549.775 kb on - strand, within GFF514 at 549.775 kb on - strand, within GFF514 at 549.795 kb on + strand, within GFF514 at 549.852 kb on + strand, within GFF514 at 549.897 kb on + strand, within GFF514 at 549.898 kb on - strand, within GFF514 at 549.898 kb on - strand, within GFF514 at 549.898 kb on - strand, within GFF514 at 549.898 kb on - strand, within GFF514 at 550.010 kb on - strand at 550.023 kb on - strand at 550.023 kb on - strand at 550.023 kb on - strand at 550.427 kb on + strand, within GFF515 at 550.428 kb on - strand, within GFF515 at 550.428 kb on - strand, within GFF515 at 550.789 kb on + strand, within GFF516 at 550.789 kb on + strand, within GFF516 at 550.789 kb on + strand, within GFF516 at 550.790 kb on - strand, within GFF516 at 550.790 kb on - strand, within GFF516 at 550.822 kb on + strand, within GFF516 at 550.822 kb on + strand, within GFF516 at 550.825 kb on + strand, within GFF516 at 550.969 kb on + strand, within GFF516 at 550.969 kb on + strand, within GFF516 at 550.970 kb on - strand, within GFF516 at 550.970 kb on - strand, within GFF516 at 551.072 kb on - strand, within GFF516 at 551.072 kb on - strand, within GFF516 at 551.101 kb on + strand, within GFF516 at 551.101 kb on + strand, within GFF516 at 551.102 kb on - strand, within GFF516 at 551.102 kb on - strand, within GFF516 at 551.102 kb on - strand, within GFF516 at 551.129 kb on - strand, within GFF516 at 551.144 kb on - strand, within GFF516 at 551.323 kb on + strand, within GFF516 at 551.323 kb on + strand, within GFF516 at 551.324 kb on - strand, within GFF516 at 551.441 kb on - strand, within GFF516 at 551.458 kb on + strand, within GFF516 at 551.459 kb on - strand, within GFF516 at 551.459 kb on - strand, within GFF516
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 549,377 + GFF514 0.62 +0.8 549,377 + GFF514 0.62 +1.0 549,377 + GFF514 0.62 +0.2 549,377 + GFF514 0.62 +0.6 549,377 + GFF514 0.62 +0.2 549,377 + GFF514 0.62 +0.5 549,378 - GFF514 0.62 +1.2 549,378 - GFF514 0.62 -0.2 549,378 - GFF514 0.62 -0.4 549,775 - GFF514 0.82 +0.1 549,775 - GFF514 0.82 +0.2 549,795 + GFF514 0.83 +0.5 549,852 + GFF514 0.86 -0.1 549,897 + GFF514 0.88 -0.1 549,898 - GFF514 0.88 -0.0 549,898 - GFF514 0.88 -0.1 549,898 - GFF514 0.88 +0.4 549,898 - GFF514 0.88 -0.4 550,010 - -0.0 550,023 - +1.2 550,023 - +0.6 550,023 - +0.3 550,427 + GFF515 0.78 -0.3 550,428 - GFF515 0.79 -0.4 550,428 - GFF515 0.79 -0.5 550,789 + GFF516 0.11 -0.2 550,789 + GFF516 0.11 +0.9 550,789 + GFF516 0.11 -0.2 550,790 - GFF516 0.11 +1.4 550,790 - GFF516 0.11 +0.6 550,822 + GFF516 0.13 -0.0 550,822 + GFF516 0.13 +0.6 550,825 + GFF516 0.13 -0.9 550,969 + GFF516 0.21 -0.1 550,969 + GFF516 0.21 +1.8 550,970 - GFF516 0.21 +0.6 550,970 - GFF516 0.21 +0.1 551,072 - GFF516 0.27 -0.1 551,072 - GFF516 0.27 -0.5 551,101 + GFF516 0.28 +1.5 551,101 + GFF516 0.28 -1.8 551,102 - GFF516 0.28 +0.9 551,102 - GFF516 0.28 +0.2 551,102 - GFF516 0.28 -1.0 551,129 - GFF516 0.30 +1.5 551,144 - GFF516 0.31 -0.0 551,323 + GFF516 0.41 +0.4 551,323 + GFF516 0.41 -1.5 551,324 - GFF516 0.41 +0.9 551,441 - GFF516 0.47 +0.7 551,458 + GFF516 0.48 +0.6 551,459 - GFF516 0.48 +0.8 551,459 - GFF516 0.48 +0.7
Or see this region's nucleotide sequence