Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4686 and GFF4687 are separated by 52 nucleotides GFF4687 and GFF4688 are separated by 72 nucleotides GFF4688 and GFF4689 are separated by 176 nucleotides GFF4689 and GFF4690 are separated by 6 nucleotides
GFF4686 - hypothetical protein, at 95,180 to 95,698
GFF4686
GFF4687 - hypothetical protein, at 95,751 to 96,071
GFF4687
GFF4688 - D-alanyl-D-alanine dipeptidase, at 96,144 to 96,830
GFF4688
GFF4689 - hypothetical protein, at 97,007 to 97,378
GFF4689
GFF4690 - hypothetical protein, at 97,385 to 97,855
GFF4690
Position (kb) 96
97 Strain fitness (log2 ratio) -1
0
1 at 95.174 kb on + strand at 95.294 kb on + strand, within GFF4686 at 95.476 kb on - strand, within GFF4686 at 95.794 kb on - strand, within GFF4687 at 95.794 kb on - strand, within GFF4687 at 95.798 kb on + strand, within GFF4687 at 95.798 kb on + strand, within GFF4687 at 95.798 kb on + strand, within GFF4687 at 95.799 kb on - strand, within GFF4687 at 96.105 kb on + strand at 96.105 kb on + strand at 96.106 kb on - strand at 96.106 kb on - strand at 96.282 kb on + strand, within GFF4688 at 96.282 kb on + strand, within GFF4688 at 96.324 kb on + strand, within GFF4688 at 96.504 kb on + strand, within GFF4688 at 96.504 kb on + strand, within GFF4688 at 96.504 kb on + strand, within GFF4688 at 96.504 kb on + strand, within GFF4688 at 96.546 kb on + strand, within GFF4688 at 96.546 kb on + strand, within GFF4688 at 96.546 kb on + strand, within GFF4688 at 96.547 kb on - strand, within GFF4688 at 96.762 kb on + strand at 96.807 kb on + strand at 96.807 kb on + strand at 96.807 kb on + strand at 96.807 kb on + strand at 96.807 kb on + strand at 96.808 kb on - strand at 96.808 kb on - strand at 96.808 kb on - strand at 96.829 kb on - strand at 97.416 kb on + strand at 97.416 kb on + strand at 97.417 kb on - strand at 97.417 kb on - strand at 97.432 kb on - strand, within GFF4690 at 97.461 kb on + strand, within GFF4690 at 97.462 kb on - strand, within GFF4690 at 97.829 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 95,174 + -0.7 95,294 + GFF4686 0.22 +0.4 95,476 - GFF4686 0.57 +0.8 95,794 - GFF4687 0.13 +0.4 95,794 - GFF4687 0.13 +0.6 95,798 + GFF4687 0.15 +0.0 95,798 + GFF4687 0.15 +1.3 95,798 + GFF4687 0.15 -1.0 95,799 - GFF4687 0.15 -1.1 96,105 + +0.2 96,105 + +0.0 96,106 - +0.9 96,106 - -0.8 96,282 + GFF4688 0.20 -0.5 96,282 + GFF4688 0.20 +0.6 96,324 + GFF4688 0.26 -0.4 96,504 + GFF4688 0.52 +0.0 96,504 + GFF4688 0.52 +0.3 96,504 + GFF4688 0.52 -0.1 96,504 + GFF4688 0.52 -0.5 96,546 + GFF4688 0.59 -0.7 96,546 + GFF4688 0.59 -1.0 96,546 + GFF4688 0.59 +1.3 96,547 - GFF4688 0.59 -0.1 96,762 + +0.6 96,807 + -1.1 96,807 + +0.1 96,807 + +0.3 96,807 + -0.3 96,807 + +0.1 96,808 - +1.2 96,808 - -0.6 96,808 - -0.4 96,829 - +0.5 97,416 + -0.1 97,416 + +0.0 97,417 - +1.0 97,417 - -0.1 97,432 - GFF4690 0.10 -0.6 97,461 + GFF4690 0.16 -0.8 97,462 - GFF4690 0.16 +1.2 97,829 - +0.4
Or see this region's nucleotide sequence