Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4671 and GFF4672 are separated by 75 nucleotides GFF4672 and GFF4673 are separated by 44 nucleotides GFF4673 and GFF4674 are separated by 192 nucleotides GFF4674 and GFF4675 are separated by 59 nucleotides
GFF4671 - UvrABC system protein B, at 78,213 to 80,906
GFF4671
GFF4672 - hypothetical protein, at 80,982 to 81,263
GFF4672
GFF4673 - hypothetical protein, at 81,308 to 81,715
GFF4673
GFF4674 - hypothetical protein, at 81,908 to 82,468
GFF4674
GFF4675 - D-xylose transporter, at 82,528 to 84,030
GFF4675
Position (kb) 81
82 Strain fitness (log2 ratio) -1
0
1 at 80.556 kb on + strand, within GFF4671 at 80.758 kb on + strand at 80.759 kb on - strand at 81.366 kb on + strand, within GFF4673 at 81.367 kb on - strand, within GFF4673 at 81.378 kb on - strand, within GFF4673 at 81.415 kb on - strand, within GFF4673 at 81.426 kb on + strand, within GFF4673 at 81.426 kb on + strand, within GFF4673 at 81.427 kb on - strand, within GFF4673 at 81.519 kb on + strand, within GFF4673 at 81.520 kb on - strand, within GFF4673 at 81.520 kb on - strand, within GFF4673 at 81.551 kb on - strand, within GFF4673 at 81.551 kb on - strand, within GFF4673 at 81.756 kb on + strand at 81.757 kb on - strand at 81.799 kb on + strand at 81.838 kb on + strand at 81.838 kb on + strand at 81.839 kb on - strand at 81.839 kb on - strand at 81.852 kb on + strand at 82.520 kb on - strand at 82.574 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 80,556 + GFF4671 0.87 +0.1 80,758 + +1.5 80,759 - -0.4 81,366 + GFF4673 0.14 -0.6 81,367 - GFF4673 0.14 -0.6 81,378 - GFF4673 0.17 -0.5 81,415 - GFF4673 0.26 +0.6 81,426 + GFF4673 0.29 +0.1 81,426 + GFF4673 0.29 -0.9 81,427 - GFF4673 0.29 -1.0 81,519 + GFF4673 0.52 -0.3 81,520 - GFF4673 0.52 +0.5 81,520 - GFF4673 0.52 -0.2 81,551 - GFF4673 0.60 +0.7 81,551 - GFF4673 0.60 -0.2 81,756 + +0.0 81,757 - +0.5 81,799 + +0.2 81,838 + +0.2 81,838 + +0.3 81,839 - +0.0 81,839 - -0.4 81,852 + +0.8 82,520 - -0.3 82,574 + +0.0
Or see this region's nucleotide sequence