Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4666 and GFF4667 are separated by 75 nucleotides GFF4667 and GFF4668 are separated by 85 nucleotides GFF4668 and GFF4669 are separated by 73 nucleotides
GFF4666 - Aldose sugar dehydrogenase YliI, at 73,218 to 74,456
GFF4666
GFF4667 - 8-oxoguanine deaminase, at 74,532 to 75,896
GFF4667
GFF4668 - hypothetical protein, at 75,982 to 76,764
GFF4668
GFF4669 - hypothetical protein, at 76,838 to 77,200
GFF4669
Position (kb) 74
75
76 Strain fitness (log2 ratio) -2
-1
0
1
2 at 73.653 kb on + strand, within GFF4666 at 73.663 kb on - strand, within GFF4666 at 74.100 kb on + strand, within GFF4666 at 74.100 kb on + strand, within GFF4666 at 74.100 kb on + strand, within GFF4666 at 74.101 kb on - strand, within GFF4666 at 74.101 kb on - strand, within GFF4666 at 74.134 kb on - strand, within GFF4666 at 74.134 kb on - strand, within GFF4666 at 74.233 kb on - strand, within GFF4666 at 74.481 kb on + strand at 74.482 kb on - strand at 74.482 kb on - strand at 74.482 kb on - strand at 74.485 kb on + strand at 74.485 kb on + strand at 74.485 kb on + strand at 74.486 kb on - strand at 74.616 kb on + strand at 74.718 kb on - strand, within GFF4667 at 74.916 kb on + strand, within GFF4667 at 74.916 kb on + strand, within GFF4667 at 74.916 kb on + strand, within GFF4667 at 74.916 kb on + strand, within GFF4667 at 74.916 kb on + strand, within GFF4667 at 74.917 kb on - strand, within GFF4667 at 74.917 kb on - strand, within GFF4667 at 74.917 kb on - strand, within GFF4667 at 74.917 kb on - strand, within GFF4667 at 74.922 kb on + strand, within GFF4667 at 75.099 kb on + strand, within GFF4667 at 75.100 kb on - strand, within GFF4667 at 75.117 kb on + strand, within GFF4667 at 75.294 kb on + strand, within GFF4667 at 75.294 kb on + strand, within GFF4667 at 75.294 kb on + strand, within GFF4667 at 75.295 kb on - strand, within GFF4667 at 75.295 kb on - strand, within GFF4667 at 75.295 kb on - strand, within GFF4667 at 75.419 kb on + strand, within GFF4667 at 75.439 kb on + strand, within GFF4667 at 75.440 kb on - strand, within GFF4667 at 75.712 kb on - strand, within GFF4667 at 75.898 kb on - strand at 76.010 kb on - strand at 76.010 kb on - strand at 76.378 kb on + strand, within GFF4668 at 76.436 kb on - strand, within GFF4668 at 76.447 kb on + strand, within GFF4668 at 76.448 kb on - strand, within GFF4668 at 76.483 kb on + strand, within GFF4668 at 76.562 kb on - strand, within GFF4668 at 76.702 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 73,653 + GFF4666 0.35 -0.8 73,663 - GFF4666 0.36 +0.3 74,100 + GFF4666 0.71 -0.2 74,100 + GFF4666 0.71 +0.0 74,100 + GFF4666 0.71 -1.2 74,101 - GFF4666 0.71 +0.8 74,101 - GFF4666 0.71 +0.2 74,134 - GFF4666 0.74 -0.6 74,134 - GFF4666 0.74 +0.5 74,233 - GFF4666 0.82 +0.0 74,481 + -1.6 74,482 - +0.8 74,482 - -0.3 74,482 - -0.7 74,485 + +0.2 74,485 + +1.8 74,485 + +0.8 74,486 - -0.7 74,616 + +0.2 74,718 - GFF4667 0.14 +1.3 74,916 + GFF4667 0.28 -0.8 74,916 + GFF4667 0.28 -0.2 74,916 + GFF4667 0.28 -0.1 74,916 + GFF4667 0.28 +0.9 74,916 + GFF4667 0.28 +1.5 74,917 - GFF4667 0.28 +1.1 74,917 - GFF4667 0.28 -1.9 74,917 - GFF4667 0.28 -0.9 74,917 - GFF4667 0.28 +1.0 74,922 + GFF4667 0.29 +1.4 75,099 + GFF4667 0.42 -0.5 75,100 - GFF4667 0.42 +0.0 75,117 + GFF4667 0.43 +2.0 75,294 + GFF4667 0.56 +0.1 75,294 + GFF4667 0.56 -0.2 75,294 + GFF4667 0.56 -0.4 75,295 - GFF4667 0.56 +0.3 75,295 - GFF4667 0.56 -0.1 75,295 - GFF4667 0.56 +1.5 75,419 + GFF4667 0.65 +0.5 75,439 + GFF4667 0.66 -0.2 75,440 - GFF4667 0.67 -0.6 75,712 - GFF4667 0.86 +0.7 75,898 - +0.1 76,010 - +0.4 76,010 - +1.8 76,378 + GFF4668 0.51 -0.2 76,436 - GFF4668 0.58 +0.2 76,447 + GFF4668 0.59 +1.3 76,448 - GFF4668 0.60 +0.4 76,483 + GFF4668 0.64 -1.8 76,562 - GFF4668 0.74 +0.7 76,702 + +0.8
Or see this region's nucleotide sequence