Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4551 and GFF4552 are separated by 192 nucleotides GFF4552 and GFF4553 are separated by 231 nucleotides GFF4553 and GFF4554 are separated by 67 nucleotides
GFF4551 - Caffeate CoA-transferase, at 132,716 to 134,320
GFF4551
GFF4552 - Ferredoxin--NADP reductase, at 134,513 to 135,286
GFF4552
GFF4553 - Glutathione S-transferase GST-6.0, at 135,518 to 136,153
GFF4553
GFF4554 - Calcium-transporting ATPase, at 136,221 to 139,043
GFF4554
Position (kb) 134
135
136 Strain fitness (log2 ratio) -1
0
1
2 at 133.559 kb on - strand, within GFF4551 at 133.560 kb on + strand, within GFF4551 at 133.560 kb on + strand, within GFF4551 at 133.570 kb on + strand, within GFF4551 at 133.572 kb on + strand, within GFF4551 at 133.572 kb on + strand, within GFF4551 at 133.572 kb on + strand, within GFF4551 at 133.572 kb on + strand, within GFF4551 at 133.572 kb on + strand, within GFF4551 at 133.572 kb on + strand, within GFF4551 at 133.573 kb on - strand, within GFF4551 at 133.573 kb on - strand, within GFF4551 at 133.573 kb on - strand, within GFF4551 at 133.573 kb on - strand, within GFF4551 at 133.825 kb on - strand, within GFF4551 at 133.825 kb on - strand, within GFF4551 at 133.825 kb on - strand, within GFF4551 at 133.825 kb on - strand, within GFF4551 at 134.008 kb on + strand, within GFF4551 at 134.008 kb on + strand, within GFF4551 at 134.008 kb on + strand, within GFF4551 at 134.008 kb on + strand, within GFF4551 at 134.009 kb on - strand, within GFF4551 at 134.010 kb on + strand, within GFF4551 at 134.010 kb on + strand, within GFF4551 at 134.010 kb on + strand, within GFF4551 at 134.010 kb on + strand, within GFF4551 at 134.011 kb on - strand, within GFF4551 at 134.011 kb on - strand, within GFF4551 at 134.495 kb on + strand at 134.669 kb on + strand, within GFF4552 at 134.670 kb on - strand, within GFF4552 at 134.672 kb on + strand, within GFF4552 at 134.844 kb on - strand, within GFF4552 at 134.907 kb on - strand, within GFF4552 at 134.907 kb on - strand, within GFF4552 at 134.907 kb on - strand, within GFF4552 at 134.907 kb on - strand, within GFF4552 at 134.907 kb on - strand, within GFF4552 at 134.907 kb on - strand, within GFF4552 at 134.967 kb on - strand, within GFF4552 at 135.039 kb on - strand, within GFF4552 at 135.039 kb on - strand, within GFF4552 at 135.039 kb on - strand, within GFF4552 at 135.041 kb on + strand, within GFF4552 at 135.042 kb on - strand, within GFF4552 at 135.111 kb on - strand, within GFF4552 at 135.254 kb on + strand at 135.254 kb on + strand at 135.254 kb on + strand at 135.254 kb on + strand at 135.255 kb on - strand at 135.284 kb on + strand at 135.647 kb on + strand, within GFF4553 at 135.872 kb on + strand, within GFF4553 at 135.872 kb on + strand, within GFF4553 at 136.029 kb on - strand, within GFF4553 at 136.030 kb on + strand, within GFF4553 at 136.171 kb on - strand at 136.214 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 133,559 - GFF4551 0.53 -0.7 133,560 + GFF4551 0.53 +0.4 133,560 + GFF4551 0.53 +0.5 133,570 + GFF4551 0.53 -0.5 133,572 + GFF4551 0.53 -0.1 133,572 + GFF4551 0.53 +0.6 133,572 + GFF4551 0.53 -0.0 133,572 + GFF4551 0.53 +0.4 133,572 + GFF4551 0.53 +0.0 133,572 + GFF4551 0.53 -0.6 133,573 - GFF4551 0.53 +0.5 133,573 - GFF4551 0.53 +0.7 133,573 - GFF4551 0.53 -0.2 133,573 - GFF4551 0.53 -0.6 133,825 - GFF4551 0.69 -0.2 133,825 - GFF4551 0.69 -0.1 133,825 - GFF4551 0.69 -0.7 133,825 - GFF4551 0.69 -0.2 134,008 + GFF4551 0.80 +0.1 134,008 + GFF4551 0.80 +1.0 134,008 + GFF4551 0.80 -1.0 134,008 + GFF4551 0.80 -0.5 134,009 - GFF4551 0.81 -1.7 134,010 + GFF4551 0.81 +0.9 134,010 + GFF4551 0.81 -0.7 134,010 + GFF4551 0.81 +0.4 134,010 + GFF4551 0.81 +0.5 134,011 - GFF4551 0.81 -0.3 134,011 - GFF4551 0.81 +0.5 134,495 + +0.5 134,669 + GFF4552 0.20 -0.6 134,670 - GFF4552 0.20 +0.0 134,672 + GFF4552 0.21 +1.1 134,844 - GFF4552 0.43 -0.6 134,907 - GFF4552 0.51 +2.2 134,907 - GFF4552 0.51 +0.4 134,907 - GFF4552 0.51 +0.1 134,907 - GFF4552 0.51 +0.3 134,907 - GFF4552 0.51 -0.4 134,907 - GFF4552 0.51 -0.7 134,967 - GFF4552 0.59 +0.3 135,039 - GFF4552 0.68 +0.6 135,039 - GFF4552 0.68 +0.5 135,039 - GFF4552 0.68 -0.6 135,041 + GFF4552 0.68 -0.3 135,042 - GFF4552 0.68 +0.2 135,111 - GFF4552 0.77 +1.5 135,254 + +0.3 135,254 + -0.5 135,254 + +0.5 135,254 + +1.6 135,255 - +0.0 135,284 + -0.8 135,647 + GFF4553 0.20 -0.7 135,872 + GFF4553 0.56 +1.3 135,872 + GFF4553 0.56 -1.6 136,029 - GFF4553 0.80 +1.0 136,030 + GFF4553 0.81 +1.0 136,171 - +0.2 136,214 + +1.1
Or see this region's nucleotide sequence