Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4267 and GFF4268 are separated by 204 nucleotides GFF4268 and GFF4269 are separated by 331 nucleotides GFF4269 and GFF4270 overlap by 55 nucleotides
GFF4267 - Hydroxyacylglutathione hydrolase, at 35,833 to 36,747
GFF4267
GFF4268 - hypothetical protein, at 36,952 to 37,659
GFF4268
GFF4269 - hypothetical protein, at 37,991 to 38,308
GFF4269
GFF4270 - hypothetical protein, at 38,254 to 38,670
GFF4270
Position (kb) 36
37
38 Strain fitness (log2 ratio) -1
0
1
2 at 35.969 kb on + strand, within GFF4267 at 35.969 kb on + strand, within GFF4267 at 35.969 kb on + strand, within GFF4267 at 35.969 kb on + strand, within GFF4267 at 35.970 kb on - strand, within GFF4267 at 35.970 kb on - strand, within GFF4267 at 35.970 kb on - strand, within GFF4267 at 35.970 kb on - strand, within GFF4267 at 35.970 kb on - strand, within GFF4267 at 36.059 kb on + strand, within GFF4267 at 36.059 kb on + strand, within GFF4267 at 36.060 kb on - strand, within GFF4267 at 36.113 kb on + strand, within GFF4267 at 36.113 kb on + strand, within GFF4267 at 36.114 kb on - strand, within GFF4267 at 36.158 kb on + strand, within GFF4267 at 36.159 kb on - strand, within GFF4267 at 36.159 kb on - strand, within GFF4267 at 36.600 kb on + strand, within GFF4267 at 36.601 kb on - strand, within GFF4267 at 36.606 kb on + strand, within GFF4267 at 36.618 kb on - strand, within GFF4267 at 36.760 kb on - strand at 36.837 kb on - strand at 36.865 kb on + strand at 36.871 kb on + strand at 36.872 kb on - strand at 36.962 kb on + strand at 36.962 kb on + strand at 36.963 kb on - strand at 37.065 kb on - strand, within GFF4268 at 37.065 kb on - strand, within GFF4268 at 37.070 kb on + strand, within GFF4268 at 37.203 kb on - strand, within GFF4268 at 37.203 kb on - strand, within GFF4268 at 37.223 kb on + strand, within GFF4268 at 37.223 kb on + strand, within GFF4268 at 37.223 kb on + strand, within GFF4268 at 37.400 kb on + strand, within GFF4268 at 37.428 kb on - strand, within GFF4268 at 37.487 kb on + strand, within GFF4268 at 37.530 kb on - strand, within GFF4268 at 37.580 kb on + strand, within GFF4268 at 37.750 kb on + strand at 37.850 kb on - strand at 37.906 kb on - strand at 38.149 kb on - strand, within GFF4269 at 38.268 kb on - strand at 38.270 kb on - strand at 38.276 kb on + strand at 38.277 kb on - strand at 38.277 kb on - strand at 38.277 kb on - strand at 38.539 kb on + strand, within GFF4270 at 38.539 kb on + strand, within GFF4270 at 38.566 kb on + strand, within GFF4270 at 38.567 kb on - strand, within GFF4270 at 38.638 kb on + strand at 38.638 kb on + strand at 38.638 kb on + strand at 38.638 kb on + strand at 38.638 kb on + strand at 38.639 kb on - strand at 38.639 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 35,969 + GFF4267 0.15 +0.3 35,969 + GFF4267 0.15 -0.0 35,969 + GFF4267 0.15 +0.2 35,969 + GFF4267 0.15 -1.3 35,970 - GFF4267 0.15 -0.1 35,970 - GFF4267 0.15 -0.3 35,970 - GFF4267 0.15 +0.5 35,970 - GFF4267 0.15 -1.6 35,970 - GFF4267 0.15 -0.5 36,059 + GFF4267 0.25 -0.3 36,059 + GFF4267 0.25 -0.2 36,060 - GFF4267 0.25 +1.1 36,113 + GFF4267 0.31 -1.3 36,113 + GFF4267 0.31 -1.5 36,114 - GFF4267 0.31 -0.5 36,158 + GFF4267 0.36 +0.5 36,159 - GFF4267 0.36 +0.2 36,159 - GFF4267 0.36 +0.0 36,600 + GFF4267 0.84 +0.5 36,601 - GFF4267 0.84 -0.3 36,606 + GFF4267 0.84 -0.3 36,618 - GFF4267 0.86 +0.1 36,760 - -0.5 36,837 - -0.1 36,865 + -0.1 36,871 + +0.3 36,872 - +0.0 36,962 + +1.1 36,962 + +0.7 36,963 - +0.3 37,065 - GFF4268 0.16 +0.8 37,065 - GFF4268 0.16 -1.1 37,070 + GFF4268 0.17 +1.5 37,203 - GFF4268 0.35 +0.2 37,203 - GFF4268 0.35 +0.8 37,223 + GFF4268 0.38 +1.4 37,223 + GFF4268 0.38 +0.8 37,223 + GFF4268 0.38 +0.7 37,400 + GFF4268 0.63 +0.9 37,428 - GFF4268 0.67 -0.2 37,487 + GFF4268 0.76 +1.2 37,530 - GFF4268 0.82 +0.9 37,580 + GFF4268 0.89 +0.3 37,750 + -0.0 37,850 - +0.8 37,906 - -0.1 38,149 - GFF4269 0.50 -0.1 38,268 - -0.9 38,270 - +0.3 38,276 + -0.5 38,277 - +1.1 38,277 - -0.7 38,277 - +0.3 38,539 + GFF4270 0.68 -0.2 38,539 + GFF4270 0.68 -0.3 38,566 + GFF4270 0.75 -0.0 38,567 - GFF4270 0.75 -0.3 38,638 + -0.1 38,638 + -0.0 38,638 + -0.8 38,638 + +2.4 38,638 + -0.0 38,639 - +0.7 38,639 - -0.9
Or see this region's nucleotide sequence