Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4222 and GFF4223 are separated by 7 nucleotides GFF4223 and GFF4224 are separated by 490 nucleotides
GFF4222 - Monoterpene epsilon-lactone hydrolase, at 250,922 to 251,848
GFF4222
GFF4223 - Phenylacetate-coenzyme A ligase, at 251,856 to 253,181
GFF4223
GFF4224 - hypothetical protein, at 253,672 to 254,346
GFF4224
Position (kb) 251
252
253
254 Strain fitness (log2 ratio) -2
-1
0
1 at 250.907 kb on - strand at 251.214 kb on + strand, within GFF4222 at 251.215 kb on - strand, within GFF4222 at 251.215 kb on - strand, within GFF4222 at 251.215 kb on - strand, within GFF4222 at 251.280 kb on + strand, within GFF4222 at 251.280 kb on + strand, within GFF4222 at 251.281 kb on - strand, within GFF4222 at 251.281 kb on - strand, within GFF4222 at 251.281 kb on - strand, within GFF4222 at 251.610 kb on + strand, within GFF4222 at 251.610 kb on + strand, within GFF4222 at 251.936 kb on + strand at 252.076 kb on + strand, within GFF4223 at 252.076 kb on + strand, within GFF4223 at 252.077 kb on - strand, within GFF4223 at 252.405 kb on + strand, within GFF4223 at 252.476 kb on - strand, within GFF4223 at 252.476 kb on - strand, within GFF4223 at 252.662 kb on - strand, within GFF4223 at 252.662 kb on - strand, within GFF4223 at 252.788 kb on - strand, within GFF4223 at 252.797 kb on - strand, within GFF4223 at 252.974 kb on - strand, within GFF4223 at 252.974 kb on - strand, within GFF4223 at 253.326 kb on - strand at 253.326 kb on - strand at 253.551 kb on + strand at 253.552 kb on - strand at 253.552 kb on - strand at 253.697 kb on - strand at 253.906 kb on + strand, within GFF4224 at 253.967 kb on - strand, within GFF4224 at 254.170 kb on + strand, within GFF4224 at 254.172 kb on + strand, within GFF4224 at 254.172 kb on + strand, within GFF4224 at 254.173 kb on - strand, within GFF4224 at 254.173 kb on - strand, within GFF4224
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 250,907 - +0.1 251,214 + GFF4222 0.31 -0.6 251,215 - GFF4222 0.32 -0.2 251,215 - GFF4222 0.32 +0.0 251,215 - GFF4222 0.32 -0.3 251,280 + GFF4222 0.39 +1.1 251,280 + GFF4222 0.39 -1.1 251,281 - GFF4222 0.39 +0.7 251,281 - GFF4222 0.39 -2.5 251,281 - GFF4222 0.39 +0.9 251,610 + GFF4222 0.74 +1.4 251,610 + GFF4222 0.74 +0.8 251,936 + -0.4 252,076 + GFF4223 0.17 -1.1 252,076 + GFF4223 0.17 +1.0 252,077 - GFF4223 0.17 +0.1 252,405 + GFF4223 0.41 +0.9 252,476 - GFF4223 0.47 +0.2 252,476 - GFF4223 0.47 -0.2 252,662 - GFF4223 0.61 +0.9 252,662 - GFF4223 0.61 +0.3 252,788 - GFF4223 0.70 +0.5 252,797 - GFF4223 0.71 +0.9 252,974 - GFF4223 0.84 +0.9 252,974 - GFF4223 0.84 -0.5 253,326 - +0.7 253,326 - -1.8 253,551 + +0.1 253,552 - +0.8 253,552 - -0.6 253,697 - -1.9 253,906 + GFF4224 0.35 +0.6 253,967 - GFF4224 0.44 -0.4 254,170 + GFF4224 0.74 +0.9 254,172 + GFF4224 0.74 +0.7 254,172 + GFF4224 0.74 -0.6 254,173 - GFF4224 0.74 +0.2 254,173 - GFF4224 0.74 +0.9
Or see this region's nucleotide sequence