Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3989 and GFF3990 overlap by 4 nucleotides GFF3990 and GFF3991 are separated by 126 nucleotides
GFF3989 - putative zinc protease, at 360,227 to 361,597
GFF3989
GFF3990 - hypothetical protein, at 361,594 to 363,006
GFF3990
GFF3991 - hypothetical protein, at 363,133 to 364,143
GFF3991
Position (kb) 361
362
363
364 Strain fitness (log2 ratio) -1
0
1 at 360.734 kb on + strand, within GFF3989 at 360.734 kb on + strand, within GFF3989 at 360.735 kb on - strand, within GFF3989 at 360.735 kb on - strand, within GFF3989 at 360.818 kb on + strand, within GFF3989 at 360.818 kb on + strand, within GFF3989 at 360.819 kb on - strand, within GFF3989 at 360.819 kb on - strand, within GFF3989 at 360.830 kb on + strand, within GFF3989 at 360.830 kb on + strand, within GFF3989 at 360.831 kb on - strand, within GFF3989 at 360.908 kb on + strand, within GFF3989 at 360.908 kb on + strand, within GFF3989 at 360.908 kb on + strand, within GFF3989 at 361.127 kb on + strand, within GFF3989 at 361.127 kb on + strand, within GFF3989 at 361.127 kb on + strand, within GFF3989 at 361.128 kb on - strand, within GFF3989 at 361.128 kb on - strand, within GFF3989 at 361.217 kb on + strand, within GFF3989 at 361.356 kb on - strand, within GFF3989 at 361.392 kb on - strand, within GFF3989 at 362.337 kb on - strand, within GFF3990 at 362.534 kb on - strand, within GFF3990 at 362.614 kb on + strand, within GFF3990 at 362.623 kb on + strand, within GFF3990 at 362.624 kb on - strand, within GFF3990 at 362.797 kb on + strand, within GFF3990 at 362.797 kb on + strand, within GFF3990 at 362.797 kb on + strand, within GFF3990 at 362.798 kb on - strand, within GFF3990 at 362.798 kb on - strand, within GFF3990 at 362.875 kb on + strand at 362.875 kb on + strand at 362.877 kb on + strand at 362.877 kb on + strand at 363.024 kb on + strand at 363.024 kb on + strand at 363.094 kb on + strand at 363.094 kb on + strand at 363.132 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 360,734 + GFF3989 0.37 -1.1 360,734 + GFF3989 0.37 -0.3 360,735 - GFF3989 0.37 +1.0 360,735 - GFF3989 0.37 -0.5 360,818 + GFF3989 0.43 -0.4 360,818 + GFF3989 0.43 -0.7 360,819 - GFF3989 0.43 +1.3 360,819 - GFF3989 0.43 -0.1 360,830 + GFF3989 0.44 +0.9 360,830 + GFF3989 0.44 +0.2 360,831 - GFF3989 0.44 -0.2 360,908 + GFF3989 0.50 +0.7 360,908 + GFF3989 0.50 -0.7 360,908 + GFF3989 0.50 -0.4 361,127 + GFF3989 0.66 -0.1 361,127 + GFF3989 0.66 -0.2 361,127 + GFF3989 0.66 -0.4 361,128 - GFF3989 0.66 -0.0 361,128 - GFF3989 0.66 +1.1 361,217 + GFF3989 0.72 +0.1 361,356 - GFF3989 0.82 -1.5 361,392 - GFF3989 0.85 +0.8 362,337 - GFF3990 0.53 -0.0 362,534 - GFF3990 0.67 -0.7 362,614 + GFF3990 0.72 -0.1 362,623 + GFF3990 0.73 -0.2 362,624 - GFF3990 0.73 -1.1 362,797 + GFF3990 0.85 +0.1 362,797 + GFF3990 0.85 +0.2 362,797 + GFF3990 0.85 +0.6 362,798 - GFF3990 0.85 -0.2 362,798 - GFF3990 0.85 +0.2 362,875 + -0.2 362,875 + -0.1 362,877 + +0.5 362,877 + -0.1 363,024 + +0.2 363,024 + +0.1 363,094 + -0.9 363,094 + -1.6 363,132 + -0.7
Or see this region's nucleotide sequence