Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3955 and GFF3956 are separated by 454 nucleotides GFF3956 and GFF3957 are separated by 96 nucleotides
GFF3955 - hypothetical protein, at 321,218 to 322,654
GFF3955
GFF3956 - hypothetical protein, at 323,109 to 325,109
GFF3956
GFF3957 - Regulator of RpoS, at 325,206 to 325,931
GFF3957
Position (kb) 323
324
325
326 Strain fitness (log2 ratio) -1
0
1
2
3 at 322.204 kb on - strand, within GFF3955 at 322.718 kb on - strand at 323.207 kb on - strand at 323.260 kb on + strand at 323.261 kb on - strand at 323.374 kb on - strand, within GFF3956 at 323.425 kb on + strand, within GFF3956 at 323.476 kb on + strand, within GFF3956 at 323.476 kb on + strand, within GFF3956 at 323.478 kb on + strand, within GFF3956 at 323.686 kb on + strand, within GFF3956 at 323.686 kb on + strand, within GFF3956 at 323.686 kb on + strand, within GFF3956 at 323.686 kb on + strand, within GFF3956 at 323.687 kb on - strand, within GFF3956 at 323.687 kb on - strand, within GFF3956 at 323.687 kb on - strand, within GFF3956 at 323.812 kb on + strand, within GFF3956 at 324.004 kb on + strand, within GFF3956 at 324.167 kb on - strand, within GFF3956 at 324.234 kb on - strand, within GFF3956 at 324.328 kb on + strand, within GFF3956 at 324.328 kb on + strand, within GFF3956 at 324.328 kb on + strand, within GFF3956 at 324.328 kb on + strand, within GFF3956 at 324.328 kb on + strand, within GFF3956 at 324.328 kb on + strand, within GFF3956 at 324.328 kb on + strand, within GFF3956 at 324.328 kb on + strand, within GFF3956 at 324.329 kb on - strand, within GFF3956 at 324.529 kb on + strand, within GFF3956 at 324.530 kb on - strand, within GFF3956 at 324.566 kb on + strand, within GFF3956 at 324.829 kb on + strand, within GFF3956 at 324.830 kb on - strand, within GFF3956 at 325.086 kb on - strand at 325.254 kb on - strand at 325.351 kb on + strand, within GFF3957 at 325.352 kb on - strand, within GFF3957 at 325.597 kb on - strand, within GFF3957 at 325.597 kb on - strand, within GFF3957 at 326.024 kb on + strand at 326.024 kb on + strand at 326.025 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 322,204 - GFF3955 0.69 +2.3 322,718 - +2.8 323,207 - -0.0 323,260 + +0.1 323,261 - +0.1 323,374 - GFF3956 0.13 +0.5 323,425 + GFF3956 0.16 +1.5 323,476 + GFF3956 0.18 +0.2 323,476 + GFF3956 0.18 +1.3 323,478 + GFF3956 0.18 +0.7 323,686 + GFF3956 0.29 +1.3 323,686 + GFF3956 0.29 +0.8 323,686 + GFF3956 0.29 +0.6 323,686 + GFF3956 0.29 +0.6 323,687 - GFF3956 0.29 -0.6 323,687 - GFF3956 0.29 +1.2 323,687 - GFF3956 0.29 +0.7 323,812 + GFF3956 0.35 +1.4 324,004 + GFF3956 0.45 +1.1 324,167 - GFF3956 0.53 +1.0 324,234 - GFF3956 0.56 +1.7 324,328 + GFF3956 0.61 +2.1 324,328 + GFF3956 0.61 -0.2 324,328 + GFF3956 0.61 +1.9 324,328 + GFF3956 0.61 +0.4 324,328 + GFF3956 0.61 +0.7 324,328 + GFF3956 0.61 +0.4 324,328 + GFF3956 0.61 +0.4 324,328 + GFF3956 0.61 +0.6 324,329 - GFF3956 0.61 +0.9 324,529 + GFF3956 0.71 +1.0 324,530 - GFF3956 0.71 +0.9 324,566 + GFF3956 0.73 -1.3 324,829 + GFF3956 0.86 -0.3 324,830 - GFF3956 0.86 -0.2 325,086 - +0.7 325,254 - -0.6 325,351 + GFF3957 0.20 -0.6 325,352 - GFF3957 0.20 -0.7 325,597 - GFF3957 0.54 -0.3 325,597 - GFF3957 0.54 -0.2 326,024 + +0.3 326,024 + +0.3 326,025 - +0.3
Or see this region's nucleotide sequence