Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF352 and GFF353 are separated by 252 nucleotides GFF353 and GFF354 are separated by 203 nucleotides GFF354 and GFF355 are separated by 1 nucleotides
GFF352 - hypothetical protein, at 360,342 to 361,520
GFF352
GFF353 - Riboflavin-binding protein RibY, at 361,773 to 362,780
GFF353
GFF354 - Bicarbonate transport ATP-binding protein CmpD, at 362,984 to 363,766
GFF354
GFF355 - Riboflavin transport system permease protein RibX, at 363,768 to 364,544
GFF355
Position (kb) 361
362
363 Strain fitness (log2 ratio) -1
0
1
2 at 360.826 kb on + strand, within GFF352 at 360.826 kb on + strand, within GFF352 at 360.826 kb on + strand, within GFF352 at 360.827 kb on - strand, within GFF352 at 360.916 kb on + strand, within GFF352 at 360.917 kb on - strand, within GFF352 at 361.111 kb on + strand, within GFF352 at 361.111 kb on + strand, within GFF352 at 361.111 kb on + strand, within GFF352 at 361.174 kb on + strand, within GFF352 at 361.175 kb on - strand, within GFF352 at 361.400 kb on - strand, within GFF352 at 361.400 kb on - strand, within GFF352 at 361.614 kb on + strand at 361.615 kb on - strand at 361.771 kb on - strand at 361.893 kb on + strand, within GFF353 at 361.893 kb on + strand, within GFF353 at 361.917 kb on + strand, within GFF353 at 361.917 kb on + strand, within GFF353 at 361.918 kb on - strand, within GFF353 at 361.918 kb on - strand, within GFF353 at 361.918 kb on - strand, within GFF353 at 361.920 kb on + strand, within GFF353 at 361.920 kb on + strand, within GFF353 at 361.920 kb on + strand, within GFF353 at 361.920 kb on + strand, within GFF353 at 361.920 kb on + strand, within GFF353 at 361.921 kb on - strand, within GFF353 at 361.921 kb on - strand, within GFF353 at 362.001 kb on + strand, within GFF353 at 362.089 kb on - strand, within GFF353 at 362.552 kb on + strand, within GFF353 at 362.701 kb on - strand at 362.701 kb on - strand at 362.932 kb on + strand at 362.932 kb on + strand at 362.932 kb on + strand at 362.933 kb on - strand at 363.014 kb on + strand at 363.014 kb on + strand at 363.015 kb on - strand at 363.015 kb on - strand at 363.645 kb on + strand, within GFF354 at 363.646 kb on - strand, within GFF354
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 360,826 + GFF352 0.41 +1.1 360,826 + GFF352 0.41 +1.5 360,826 + GFF352 0.41 -0.2 360,827 - GFF352 0.41 -0.2 360,916 + GFF352 0.49 +0.4 360,917 - GFF352 0.49 -0.1 361,111 + GFF352 0.65 -0.6 361,111 + GFF352 0.65 +0.1 361,111 + GFF352 0.65 +0.4 361,174 + GFF352 0.71 +1.6 361,175 - GFF352 0.71 +0.2 361,400 - GFF352 0.90 -0.3 361,400 - GFF352 0.90 +0.2 361,614 + +0.2 361,615 - +0.3 361,771 - +0.4 361,893 + GFF353 0.12 +1.6 361,893 + GFF353 0.12 +0.1 361,917 + GFF353 0.14 +1.8 361,917 + GFF353 0.14 -0.4 361,918 - GFF353 0.14 -0.5 361,918 - GFF353 0.14 +0.0 361,918 - GFF353 0.14 -0.7 361,920 + GFF353 0.15 -0.6 361,920 + GFF353 0.15 +0.3 361,920 + GFF353 0.15 -0.0 361,920 + GFF353 0.15 +0.2 361,920 + GFF353 0.15 +1.0 361,921 - GFF353 0.15 +0.6 361,921 - GFF353 0.15 +0.3 362,001 + GFF353 0.23 +0.0 362,089 - GFF353 0.31 +0.3 362,552 + GFF353 0.77 +0.9 362,701 - -1.1 362,701 - -0.9 362,932 + +0.6 362,932 + -0.3 362,932 + +1.3 362,933 - -0.4 363,014 + +1.1 363,014 + -0.7 363,015 - +1.6 363,015 - +0.4 363,645 + GFF354 0.84 -0.3 363,646 - GFF354 0.85 -0.6
Or see this region's nucleotide sequence