Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3501 and GFF3502 are separated by 674 nucleotides GFF3502 and GFF3503 are separated by 4 nucleotides GFF3503 and GFF3504 are separated by 4 nucleotides GFF3504 and GFF3505 overlap by 4 nucleotides
GFF3501 - hypothetical protein, at 358,340 to 359,038
GFF3501
GFF3502 - hypothetical protein, at 359,713 to 360,003
GFF3502
GFF3503 - hypothetical protein, at 360,008 to 360,577
GFF3503
GFF3504 - hypothetical protein, at 360,582 to 360,833
GFF3504
GFF3505 - hypothetical protein, at 360,830 to 361,189
GFF3505
Position (kb) 359
360
361 Strain fitness (log2 ratio) -1
0
1 at 359.319 kb on + strand at 359.319 kb on + strand at 359.363 kb on + strand at 359.463 kb on - strand at 359.463 kb on - strand at 359.772 kb on + strand, within GFF3502 at 359.782 kb on - strand, within GFF3502 at 359.793 kb on + strand, within GFF3502 at 359.794 kb on - strand, within GFF3502 at 359.794 kb on - strand, within GFF3502 at 359.818 kb on + strand, within GFF3502 at 359.818 kb on + strand, within GFF3502 at 359.818 kb on + strand, within GFF3502 at 359.819 kb on - strand, within GFF3502 at 359.894 kb on - strand, within GFF3502 at 359.940 kb on + strand, within GFF3502 at 359.940 kb on + strand, within GFF3502 at 359.940 kb on + strand, within GFF3502 at 359.940 kb on + strand, within GFF3502 at 359.940 kb on + strand, within GFF3502 at 360.060 kb on + strand at 360.060 kb on + strand at 360.060 kb on + strand at 360.061 kb on - strand at 360.061 kb on - strand at 360.240 kb on + strand, within GFF3503 at 360.240 kb on + strand, within GFF3503 at 360.240 kb on + strand, within GFF3503 at 360.240 kb on + strand, within GFF3503 at 360.240 kb on + strand, within GFF3503 at 360.240 kb on + strand, within GFF3503 at 360.241 kb on - strand, within GFF3503 at 360.241 kb on - strand, within GFF3503 at 360.241 kb on - strand, within GFF3503 at 360.241 kb on - strand, within GFF3503 at 360.241 kb on - strand, within GFF3503 at 360.241 kb on - strand, within GFF3503
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 359,319 + -1.6 359,319 + +1.1 359,363 + -0.1 359,463 - -0.6 359,463 - -0.2 359,772 + GFF3502 0.20 +0.2 359,782 - GFF3502 0.24 -0.4 359,793 + GFF3502 0.27 +0.6 359,794 - GFF3502 0.28 +0.7 359,794 - GFF3502 0.28 -1.4 359,818 + GFF3502 0.36 -0.3 359,818 + GFF3502 0.36 +0.2 359,818 + GFF3502 0.36 -0.1 359,819 - GFF3502 0.36 -0.1 359,894 - GFF3502 0.62 +0.2 359,940 + GFF3502 0.78 -0.6 359,940 + GFF3502 0.78 +0.0 359,940 + GFF3502 0.78 +1.1 359,940 + GFF3502 0.78 -1.6 359,940 + GFF3502 0.78 -0.2 360,060 + -0.1 360,060 + -1.6 360,060 + -0.0 360,061 - -0.9 360,061 - +0.3 360,240 + GFF3503 0.41 +0.3 360,240 + GFF3503 0.41 +0.0 360,240 + GFF3503 0.41 +0.0 360,240 + GFF3503 0.41 +0.3 360,240 + GFF3503 0.41 -0.1 360,240 + GFF3503 0.41 +0.2 360,241 - GFF3503 0.41 +0.2 360,241 - GFF3503 0.41 -0.4 360,241 - GFF3503 0.41 -0.3 360,241 - GFF3503 0.41 +0.8 360,241 - GFF3503 0.41 -0.3 360,241 - GFF3503 0.41 -1.3
Or see this region's nucleotide sequence