Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3466 and GFF3467 overlap by 107 nucleotides GFF3467 and GFF3468 are separated by 131 nucleotides GFF3468 and GFF3469 are separated by 549 nucleotides
GFF3466 - Vitamin B12 import ATP-binding protein BtuD, at 319,055 to 320,269
GFF3466
GFF3467 - hypothetical protein, at 320,163 to 320,651
GFF3467
GFF3468 - Ferrous iron permease EfeU, at 320,783 to 321,649
GFF3468
GFF3469 - hypothetical protein, at 322,199 to 323,473
GFF3469
Position (kb) 320
321
322 Strain fitness (log2 ratio) -1
0
1
2 at 320.267 kb on + strand at 320.267 kb on + strand at 320.267 kb on + strand at 320.356 kb on - strand, within GFF3467 at 320.390 kb on + strand, within GFF3467 at 320.391 kb on - strand, within GFF3467 at 320.391 kb on - strand, within GFF3467 at 320.452 kb on + strand, within GFF3467 at 320.453 kb on - strand, within GFF3467 at 320.728 kb on + strand at 320.901 kb on + strand, within GFF3468 at 320.902 kb on - strand, within GFF3468 at 321.243 kb on + strand, within GFF3468 at 321.244 kb on - strand, within GFF3468 at 321.244 kb on - strand, within GFF3468 at 321.244 kb on - strand, within GFF3468 at 321.244 kb on - strand, within GFF3468 at 321.449 kb on - strand, within GFF3468 at 321.599 kb on + strand at 321.599 kb on + strand at 321.771 kb on + strand at 321.879 kb on - strand at 321.879 kb on - strand at 321.979 kb on - strand at 321.988 kb on - strand at 322.099 kb on + strand at 322.099 kb on + strand at 322.099 kb on + strand at 322.100 kb on - strand at 322.299 kb on - strand at 322.322 kb on + strand at 322.322 kb on + strand at 322.322 kb on + strand at 322.322 kb on + strand at 322.323 kb on - strand at 322.439 kb on + strand, within GFF3469 at 322.443 kb on - strand, within GFF3469 at 322.443 kb on - strand, within GFF3469 at 322.586 kb on + strand, within GFF3469
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 320,267 + -1.0 320,267 + -0.3 320,267 + -0.3 320,356 - GFF3467 0.39 +1.9 320,390 + GFF3467 0.46 -0.5 320,391 - GFF3467 0.47 +0.2 320,391 - GFF3467 0.47 -0.2 320,452 + GFF3467 0.59 +0.7 320,453 - GFF3467 0.59 +1.1 320,728 + +0.4 320,901 + GFF3468 0.14 -0.4 320,902 - GFF3468 0.14 +0.2 321,243 + GFF3468 0.53 -0.0 321,244 - GFF3468 0.53 -0.2 321,244 - GFF3468 0.53 +0.0 321,244 - GFF3468 0.53 -0.1 321,244 - GFF3468 0.53 -0.4 321,449 - GFF3468 0.77 -0.6 321,599 + -0.8 321,599 + +0.2 321,771 + -0.9 321,879 - +0.0 321,879 - +0.5 321,979 - -0.4 321,988 - -0.4 322,099 + -0.3 322,099 + +0.6 322,099 + -1.0 322,100 - -1.2 322,299 - +0.1 322,322 + +0.6 322,322 + -1.3 322,322 + -0.6 322,322 + -0.7 322,323 - +1.1 322,439 + GFF3469 0.19 +0.9 322,443 - GFF3469 0.19 -0.1 322,443 - GFF3469 0.19 -0.9 322,586 + GFF3469 0.30 +0.9
Or see this region's nucleotide sequence