Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3431 and GFF3432 are separated by 227 nucleotides GFF3432 and GFF3433 are separated by 742 nucleotides
GFF3431 - Serine hydroxymethyltransferase 2, at 281,763 to 283,037
GFF3431
GFF3432 - Glutamyl-tRNA(Gln) amidotransferase subunit A, at 283,265 to 284,530
GFF3432
GFF3433 - Phosphate-import ATP-binding protein PhnC, at 285,273 to 286,085
GFF3433
Position (kb) 283
284
285 Strain fitness (log2 ratio) -1
0
1
2 at 282.402 kb on + strand, within GFF3431 at 282.402 kb on + strand, within GFF3431 at 282.402 kb on + strand, within GFF3431 at 282.402 kb on + strand, within GFF3431 at 282.403 kb on - strand, within GFF3431 at 282.618 kb on + strand, within GFF3431 at 282.710 kb on + strand, within GFF3431 at 282.711 kb on - strand, within GFF3431 at 282.711 kb on - strand, within GFF3431 at 283.024 kb on - strand at 283.024 kb on - strand at 283.024 kb on - strand at 283.024 kb on - strand at 283.319 kb on - strand at 283.319 kb on - strand at 283.511 kb on + strand, within GFF3432 at 283.512 kb on - strand, within GFF3432 at 283.526 kb on + strand, within GFF3432 at 283.526 kb on + strand, within GFF3432 at 283.526 kb on + strand, within GFF3432 at 283.527 kb on - strand, within GFF3432 at 283.527 kb on - strand, within GFF3432 at 283.527 kb on - strand, within GFF3432 at 284.162 kb on + strand, within GFF3432 at 284.234 kb on + strand, within GFF3432 at 284.235 kb on - strand, within GFF3432 at 284.516 kb on + strand at 284.538 kb on + strand at 284.582 kb on + strand at 284.583 kb on - strand at 284.855 kb on + strand at 285.113 kb on + strand at 285.322 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 282,402 + GFF3431 0.50 -0.6 282,402 + GFF3431 0.50 -0.2 282,402 + GFF3431 0.50 +0.2 282,402 + GFF3431 0.50 +0.2 282,403 - GFF3431 0.50 -0.2 282,618 + GFF3431 0.67 -0.3 282,710 + GFF3431 0.74 +0.0 282,711 - GFF3431 0.74 +0.2 282,711 - GFF3431 0.74 -0.2 283,024 - -1.0 283,024 - +0.6 283,024 - +0.8 283,024 - -0.2 283,319 - -0.8 283,319 - -0.5 283,511 + GFF3432 0.19 +0.1 283,512 - GFF3432 0.20 +0.2 283,526 + GFF3432 0.21 -0.4 283,526 + GFF3432 0.21 +0.8 283,526 + GFF3432 0.21 -0.7 283,527 - GFF3432 0.21 -0.5 283,527 - GFF3432 0.21 +0.4 283,527 - GFF3432 0.21 -0.9 284,162 + GFF3432 0.71 -0.2 284,234 + GFF3432 0.77 +1.9 284,235 - GFF3432 0.77 -0.1 284,516 + +0.2 284,538 + -1.0 284,582 + +0.5 284,583 - -0.0 284,855 + +0.6 285,113 + +0.1 285,322 + +2.1
Or see this region's nucleotide sequence