Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3166 and GFF3167 are separated by 355 nucleotides GFF3167 and GFF3168 are separated by 17 nucleotides GFF3168 and GFF3169 overlap by 4 nucleotides
GFF3166 - Periplasmic serine endoprotease DegP, at 905,639 to 907,129
GFF3166
GFF3167 - hypothetical protein, at 907,485 to 907,673
GFF3167
GFF3168 - Modulator of FtsH protease HflC, at 907,691 to 908,605
GFF3168
GFF3169 - Modulator of FtsH protease HflK, at 908,602 to 909,735
GFF3169
Position (kb) 907
908
909 Strain fitness (log2 ratio) -1
0
1 at 906.880 kb on - strand, within GFF3166 at 907.824 kb on + strand, within GFF3168 at 907.825 kb on - strand, within GFF3168 at 907.825 kb on - strand, within GFF3168 at 907.873 kb on - strand, within GFF3168 at 908.299 kb on - strand, within GFF3168 at 908.299 kb on - strand, within GFF3168 at 908.416 kb on + strand, within GFF3168 at 908.416 kb on + strand, within GFF3168 at 908.418 kb on + strand, within GFF3168 at 908.530 kb on - strand at 908.530 kb on - strand at 908.655 kb on + strand at 908.656 kb on - strand at 908.765 kb on + strand, within GFF3169 at 908.766 kb on - strand, within GFF3169 at 908.766 kb on - strand, within GFF3169 at 908.802 kb on - strand, within GFF3169 at 908.933 kb on + strand, within GFF3169 at 909.065 kb on + strand, within GFF3169 at 909.065 kb on + strand, within GFF3169 at 909.227 kb on + strand, within GFF3169 at 909.437 kb on + strand, within GFF3169 at 909.438 kb on - strand, within GFF3169 at 909.438 kb on - strand, within GFF3169 at 909.438 kb on - strand, within GFF3169
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 906,880 - GFF3166 0.83 -0.6 907,824 + GFF3168 0.15 -0.7 907,825 - GFF3168 0.15 +0.5 907,825 - GFF3168 0.15 -0.4 907,873 - GFF3168 0.20 -0.5 908,299 - GFF3168 0.66 -1.3 908,299 - GFF3168 0.66 -0.2 908,416 + GFF3168 0.79 +0.1 908,416 + GFF3168 0.79 +0.6 908,418 + GFF3168 0.79 +0.7 908,530 - -0.9 908,530 - +0.0 908,655 + -0.3 908,656 - -0.7 908,765 + GFF3169 0.14 +0.5 908,766 - GFF3169 0.14 -1.0 908,766 - GFF3169 0.14 +1.2 908,802 - GFF3169 0.18 +0.6 908,933 + GFF3169 0.29 +0.6 909,065 + GFF3169 0.41 -1.2 909,065 + GFF3169 0.41 +1.1 909,227 + GFF3169 0.55 -0.5 909,437 + GFF3169 0.74 -0.3 909,438 - GFF3169 0.74 -0.7 909,438 - GFF3169 0.74 -0.3 909,438 - GFF3169 0.74 +0.1
Or see this region's nucleotide sequence