Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3094 and GFF3095 are separated by 21 nucleotides GFF3095 and GFF3096 are separated by 57 nucleotides GFF3096 and GFF3097 are separated by 87 nucleotides
GFF3094 - hypothetical protein, at 823,819 to 824,916
GFF3094
GFF3095 - hypothetical protein, at 824,938 to 825,477
GFF3095
GFF3096 - hypothetical protein, at 825,535 to 826,173
GFF3096
GFF3097 - putative NTE family protein, at 826,261 to 827,340
GFF3097
Position (kb) 825
826
827 Strain fitness (log2 ratio) -1
0
1 at 825.098 kb on + strand, within GFF3095 at 825.098 kb on + strand, within GFF3095 at 825.098 kb on + strand, within GFF3095 at 825.098 kb on + strand, within GFF3095 at 825.099 kb on - strand, within GFF3095 at 825.099 kb on - strand, within GFF3095 at 825.099 kb on - strand, within GFF3095 at 825.099 kb on - strand, within GFF3095 at 825.144 kb on - strand, within GFF3095 at 825.617 kb on + strand, within GFF3096 at 825.618 kb on - strand, within GFF3096 at 825.779 kb on + strand, within GFF3096 at 825.779 kb on + strand, within GFF3096 at 825.779 kb on + strand, within GFF3096 at 825.780 kb on - strand, within GFF3096 at 825.780 kb on - strand, within GFF3096 at 826.046 kb on + strand, within GFF3096 at 826.237 kb on + strand at 826.237 kb on + strand at 826.237 kb on + strand at 826.237 kb on + strand at 826.238 kb on - strand at 826.238 kb on - strand at 826.238 kb on - strand at 826.238 kb on - strand at 826.238 kb on - strand at 826.238 kb on - strand at 826.239 kb on + strand at 826.239 kb on + strand at 826.240 kb on - strand at 826.240 kb on - strand at 826.240 kb on - strand at 826.289 kb on - strand at 826.362 kb on + strand at 826.443 kb on + strand, within GFF3097 at 826.779 kb on - strand, within GFF3097
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 825,098 + GFF3095 0.30 -1.3 825,098 + GFF3095 0.30 +0.2 825,098 + GFF3095 0.30 -0.5 825,098 + GFF3095 0.30 -0.6 825,099 - GFF3095 0.30 -0.1 825,099 - GFF3095 0.30 +0.0 825,099 - GFF3095 0.30 +0.8 825,099 - GFF3095 0.30 -0.7 825,144 - GFF3095 0.38 +0.3 825,617 + GFF3096 0.13 -1.1 825,618 - GFF3096 0.13 -0.2 825,779 + GFF3096 0.38 -0.4 825,779 + GFF3096 0.38 -0.9 825,779 + GFF3096 0.38 +0.8 825,780 - GFF3096 0.38 -0.1 825,780 - GFF3096 0.38 -0.3 826,046 + GFF3096 0.80 +0.4 826,237 + -0.4 826,237 + -1.1 826,237 + +0.5 826,237 + -0.1 826,238 - -1.6 826,238 - -0.7 826,238 - +0.1 826,238 - -0.2 826,238 - -0.5 826,238 - +0.3 826,239 + -0.5 826,239 + +0.8 826,240 - +0.4 826,240 - -0.7 826,240 - +0.8 826,289 - -0.8 826,362 + +0.0 826,443 + GFF3097 0.17 +0.1 826,779 - GFF3097 0.48 +0.5
Or see this region's nucleotide sequence