Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2994 and GFF2995 overlap by 4 nucleotides GFF2995 and GFF2996 are separated by 23 nucleotides GFF2996 and GFF2997 are separated by 39 nucleotides GFF2997 and GFF2998 overlap by 4 nucleotides
GFF2994 - Hemin transport system permease protein HmuU, at 722,078 to 723,064
GFF2994
GFF2995 - Hemin import ATP-binding protein HmuV, at 723,061 to 723,816
GFF2995
GFF2996 - hypothetical protein, at 723,840 to 724,922
GFF2996
GFF2997 - Modulator of FtsH protease HflC, at 724,962 to 725,894
GFF2997
GFF2998 - hypothetical protein, at 725,891 to 727,009
GFF2998
Position (kb) 723
724
725 Strain fitness (log2 ratio) -1
0
1
2 at 723.241 kb on + strand, within GFF2995 at 723.242 kb on - strand, within GFF2995 at 723.453 kb on + strand, within GFF2995 at 723.454 kb on - strand, within GFF2995 at 723.814 kb on + strand at 723.829 kb on - strand at 723.917 kb on - strand at 723.917 kb on - strand at 723.938 kb on - strand at 724.523 kb on - strand, within GFF2996 at 724.667 kb on - strand, within GFF2996 at 725.146 kb on + strand, within GFF2997 at 725.146 kb on + strand, within GFF2997 at 725.167 kb on + strand, within GFF2997 at 725.168 kb on - strand, within GFF2997 at 725.168 kb on - strand, within GFF2997 at 725.356 kb on + strand, within GFF2997 at 725.356 kb on + strand, within GFF2997 at 725.357 kb on - strand, within GFF2997 at 725.357 kb on - strand, within GFF2997 at 725.357 kb on - strand, within GFF2997 at 725.357 kb on - strand, within GFF2997 at 725.357 kb on - strand, within GFF2997 at 725.357 kb on - strand, within GFF2997 at 725.629 kb on + strand, within GFF2997 at 725.629 kb on + strand, within GFF2997 at 725.630 kb on - strand, within GFF2997 at 725.630 kb on - strand, within GFF2997 at 725.630 kb on - strand, within GFF2997 at 725.630 kb on - strand, within GFF2997 at 725.630 kb on - strand, within GFF2997 at 725.630 kb on - strand, within GFF2997 at 725.713 kb on + strand, within GFF2997 at 725.713 kb on + strand, within GFF2997 at 725.747 kb on - strand, within GFF2997
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 723,241 + GFF2995 0.24 +1.8 723,242 - GFF2995 0.24 +0.1 723,453 + GFF2995 0.52 -0.7 723,454 - GFF2995 0.52 +0.3 723,814 + -0.5 723,829 - -1.5 723,917 - -1.0 723,917 - -0.8 723,938 - +0.3 724,523 - GFF2996 0.63 +0.2 724,667 - GFF2996 0.76 -0.7 725,146 + GFF2997 0.20 -1.5 725,146 + GFF2997 0.20 +0.5 725,167 + GFF2997 0.22 -0.2 725,168 - GFF2997 0.22 -0.4 725,168 - GFF2997 0.22 +0.7 725,356 + GFF2997 0.42 +0.8 725,356 + GFF2997 0.42 -1.6 725,357 - GFF2997 0.42 +0.6 725,357 - GFF2997 0.42 -0.2 725,357 - GFF2997 0.42 +0.7 725,357 - GFF2997 0.42 -1.5 725,357 - GFF2997 0.42 +0.5 725,357 - GFF2997 0.42 -1.3 725,629 + GFF2997 0.71 -0.5 725,629 + GFF2997 0.71 -0.5 725,630 - GFF2997 0.72 +0.0 725,630 - GFF2997 0.72 +0.8 725,630 - GFF2997 0.72 -0.6 725,630 - GFF2997 0.72 -0.3 725,630 - GFF2997 0.72 +0.1 725,630 - GFF2997 0.72 -0.3 725,713 + GFF2997 0.80 +0.4 725,713 + GFF2997 0.80 +0.3 725,747 - GFF2997 0.84 -0.7
Or see this region's nucleotide sequence