Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2982 and GFF2983 are separated by 38 nucleotides GFF2983 and GFF2984 are separated by 12 nucleotides GFF2984 and GFF2985 are separated by 19 nucleotides GFF2985 and GFF2986 are separated by 1 nucleotides
GFF2982 - Sensor protein KdpD, at 705,460 to 708,177
GFF2982
GFF2983 - Potassium-transporting ATPase KdpC subunit, at 708,216 to 708,824
GFF2983
GFF2984 - Potassium-transporting ATPase ATP-binding subunit, at 708,837 to 710,900
GFF2984
GFF2985 - hypothetical protein, at 710,920 to 711,060
GFF2985
GFF2986 - Potassium-transporting ATPase potassium-binding subunit, at 711,062 to 712,771
GFF2986
Position (kb) 708
709
710
711 Strain fitness (log2 ratio) -1
0
1 at 708.053 kb on + strand at 708.054 kb on - strand at 708.054 kb on - strand at 708.217 kb on + strand at 708.218 kb on - strand at 708.218 kb on - strand at 708.559 kb on + strand, within GFF2983 at 708.559 kb on + strand, within GFF2983 at 708.559 kb on + strand, within GFF2983 at 708.560 kb on - strand, within GFF2983 at 708.758 kb on - strand, within GFF2983 at 708.917 kb on - strand at 709.127 kb on - strand, within GFF2984 at 709.555 kb on + strand, within GFF2984 at 709.556 kb on - strand, within GFF2984 at 709.828 kb on + strand, within GFF2984 at 709.829 kb on - strand, within GFF2984 at 710.173 kb on + strand, within GFF2984 at 710.174 kb on - strand, within GFF2984 at 710.300 kb on + strand, within GFF2984 at 710.300 kb on + strand, within GFF2984 at 710.301 kb on - strand, within GFF2984 at 710.301 kb on - strand, within GFF2984 at 710.301 kb on - strand, within GFF2984 at 710.301 kb on - strand, within GFF2984 at 711.183 kb on - strand at 711.321 kb on + strand, within GFF2986 at 711.321 kb on + strand, within GFF2986 at 711.322 kb on - strand, within GFF2986 at 711.322 kb on - strand, within GFF2986 at 711.552 kb on + strand, within GFF2986 at 711.553 kb on - strand, within GFF2986 at 711.553 kb on - strand, within GFF2986 at 711.553 kb on - strand, within GFF2986 at 711.621 kb on + strand, within GFF2986 at 711.621 kb on + strand, within GFF2986 at 711.621 kb on + strand, within GFF2986 at 711.622 kb on - strand, within GFF2986 at 711.622 kb on - strand, within GFF2986 at 711.622 kb on - strand, within GFF2986 at 711.622 kb on - strand, within GFF2986 at 711.622 kb on - strand, within GFF2986 at 711.865 kb on - strand, within GFF2986
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 708,053 + -0.6 708,054 - +0.2 708,054 - -0.8 708,217 + -0.6 708,218 - +0.7 708,218 - -0.3 708,559 + GFF2983 0.56 -1.1 708,559 + GFF2983 0.56 -0.6 708,559 + GFF2983 0.56 -0.0 708,560 - GFF2983 0.56 +1.2 708,758 - GFF2983 0.89 -0.4 708,917 - -1.0 709,127 - GFF2984 0.14 -1.3 709,555 + GFF2984 0.35 -0.6 709,556 - GFF2984 0.35 +0.5 709,828 + GFF2984 0.48 +0.4 709,829 - GFF2984 0.48 +1.2 710,173 + GFF2984 0.65 -0.1 710,174 - GFF2984 0.65 -0.3 710,300 + GFF2984 0.71 -0.2 710,300 + GFF2984 0.71 -0.8 710,301 - GFF2984 0.71 -1.0 710,301 - GFF2984 0.71 +0.3 710,301 - GFF2984 0.71 -0.2 710,301 - GFF2984 0.71 -1.0 711,183 - +0.1 711,321 + GFF2986 0.15 +0.3 711,321 + GFF2986 0.15 -0.8 711,322 - GFF2986 0.15 -1.2 711,322 - GFF2986 0.15 -0.4 711,552 + GFF2986 0.29 -0.3 711,553 - GFF2986 0.29 -0.1 711,553 - GFF2986 0.29 +0.0 711,553 - GFF2986 0.29 +0.8 711,621 + GFF2986 0.33 -0.1 711,621 + GFF2986 0.33 -1.5 711,621 + GFF2986 0.33 -0.1 711,622 - GFF2986 0.33 -1.2 711,622 - GFF2986 0.33 +1.0 711,622 - GFF2986 0.33 +0.3 711,622 - GFF2986 0.33 -0.3 711,622 - GFF2986 0.33 -0.4 711,865 - GFF2986 0.47 -0.1
Or see this region's nucleotide sequence