Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2806 and GFF2807 are separated by 183 nucleotides GFF2807 and GFF2808 are separated by 118 nucleotides
GFF2806 - Pyruvate dehydrogenase [ubiquinone], at 511,988 to 513,721
GFF2806
GFF2807 - N-ethylmaleimide reductase, at 513,905 to 515,053
GFF2807
GFF2808 - hypothetical protein, at 515,172 to 516,374
GFF2808
Position (kb) 513
514
515
516 Strain fitness (log2 ratio) -2
-1
0
1 at 512.917 kb on - strand, within GFF2806 at 513.008 kb on + strand, within GFF2806 at 513.008 kb on + strand, within GFF2806 at 513.008 kb on + strand, within GFF2806 at 513.008 kb on + strand, within GFF2806 at 513.009 kb on - strand, within GFF2806 at 513.009 kb on - strand, within GFF2806 at 513.009 kb on - strand, within GFF2806 at 513.080 kb on + strand, within GFF2806 at 513.080 kb on + strand, within GFF2806 at 513.080 kb on + strand, within GFF2806 at 513.080 kb on + strand, within GFF2806 at 513.081 kb on - strand, within GFF2806 at 513.167 kb on + strand, within GFF2806 at 513.167 kb on + strand, within GFF2806 at 513.830 kb on - strand at 513.878 kb on - strand at 513.963 kb on - strand at 514.028 kb on + strand, within GFF2807 at 514.031 kb on + strand, within GFF2807 at 514.031 kb on + strand, within GFF2807 at 514.031 kb on + strand, within GFF2807 at 514.032 kb on - strand, within GFF2807 at 514.032 kb on - strand, within GFF2807 at 514.283 kb on + strand, within GFF2807 at 514.284 kb on - strand, within GFF2807 at 514.295 kb on + strand, within GFF2807 at 514.295 kb on + strand, within GFF2807 at 514.295 kb on + strand, within GFF2807 at 514.344 kb on - strand, within GFF2807 at 514.436 kb on + strand, within GFF2807 at 514.437 kb on - strand, within GFF2807 at 514.934 kb on + strand, within GFF2807 at 514.934 kb on + strand, within GFF2807 at 514.935 kb on - strand, within GFF2807 at 514.935 kb on - strand, within GFF2807 at 514.955 kb on + strand at 514.955 kb on + strand at 514.955 kb on + strand at 514.956 kb on - strand at 514.956 kb on - strand at 515.162 kb on + strand at 515.163 kb on - strand at 515.248 kb on + strand at 515.248 kb on + strand at 515.248 kb on + strand at 515.248 kb on + strand at 515.249 kb on - strand at 515.249 kb on - strand at 515.452 kb on + strand, within GFF2808 at 515.452 kb on + strand, within GFF2808 at 515.749 kb on + strand, within GFF2808 at 515.750 kb on - strand, within GFF2808 at 515.750 kb on - strand, within GFF2808 at 515.750 kb on - strand, within GFF2808 at 515.750 kb on - strand, within GFF2808 at 515.761 kb on + strand, within GFF2808 at 515.832 kb on - strand, within GFF2808 at 515.944 kb on + strand, within GFF2808 at 515.944 kb on + strand, within GFF2808 at 515.944 kb on + strand, within GFF2808
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 512,917 - GFF2806 0.54 -0.2 513,008 + GFF2806 0.59 +0.2 513,008 + GFF2806 0.59 +0.3 513,008 + GFF2806 0.59 -1.6 513,008 + GFF2806 0.59 -0.5 513,009 - GFF2806 0.59 +0.6 513,009 - GFF2806 0.59 +0.4 513,009 - GFF2806 0.59 -1.3 513,080 + GFF2806 0.63 +0.2 513,080 + GFF2806 0.63 -0.2 513,080 + GFF2806 0.63 -0.4 513,080 + GFF2806 0.63 -0.9 513,081 - GFF2806 0.63 -0.2 513,167 + GFF2806 0.68 -0.7 513,167 + GFF2806 0.68 -1.2 513,830 - +0.5 513,878 - +0.1 513,963 - +0.1 514,028 + GFF2807 0.11 -2.0 514,031 + GFF2807 0.11 -0.6 514,031 + GFF2807 0.11 -0.4 514,031 + GFF2807 0.11 +0.5 514,032 - GFF2807 0.11 -0.1 514,032 - GFF2807 0.11 +0.5 514,283 + GFF2807 0.33 +0.9 514,284 - GFF2807 0.33 +0.4 514,295 + GFF2807 0.34 -0.5 514,295 + GFF2807 0.34 -0.4 514,295 + GFF2807 0.34 +0.1 514,344 - GFF2807 0.38 -0.7 514,436 + GFF2807 0.46 -0.0 514,437 - GFF2807 0.46 +0.2 514,934 + GFF2807 0.90 -0.5 514,934 + GFF2807 0.90 +0.2 514,935 - GFF2807 0.90 -1.7 514,935 - GFF2807 0.90 -0.1 514,955 + +0.0 514,955 + -0.3 514,955 + +1.1 514,956 - -1.0 514,956 - -0.1 515,162 + +0.2 515,163 - -0.7 515,248 + -0.3 515,248 + -0.8 515,248 + +0.7 515,248 + +0.3 515,249 - +0.6 515,249 - -0.1 515,452 + GFF2808 0.23 -1.5 515,452 + GFF2808 0.23 -0.7 515,749 + GFF2808 0.48 +0.1 515,750 - GFF2808 0.48 -1.4 515,750 - GFF2808 0.48 -0.4 515,750 - GFF2808 0.48 +0.1 515,750 - GFF2808 0.48 +0.6 515,761 + GFF2808 0.49 +0.0 515,832 - GFF2808 0.55 -0.3 515,944 + GFF2808 0.64 -0.7 515,944 + GFF2808 0.64 -0.1 515,944 + GFF2808 0.64 -0.2
Or see this region's nucleotide sequence