Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2649 and GFF2650 are separated by 399 nucleotides GFF2650 and GFF2651 are separated by 237 nucleotides
GFF2649 - hypothetical protein, at 335,399 to 335,941
GFF2649
GFF2650 - Oligo-1,6-glucosidase 1, at 336,341 to 337,969
GFF2650
GFF2651 - Methanol dehydrogenase [cytochrome c] subunit 1, at 338,207 to 339,928
GFF2651
Position (kb) 336
337
338 Strain fitness (log2 ratio) -2
-1
0
1
2 at 335.352 kb on + strand at 335.352 kb on + strand at 335.352 kb on + strand at 335.353 kb on - strand at 335.353 kb on - strand at 335.412 kb on + strand at 335.412 kb on + strand at 335.413 kb on - strand at 335.413 kb on - strand at 335.413 kb on - strand at 335.486 kb on - strand, within GFF2649 at 335.486 kb on - strand, within GFF2649 at 335.762 kb on - strand, within GFF2649 at 335.762 kb on - strand, within GFF2649 at 335.791 kb on + strand, within GFF2649 at 335.791 kb on + strand, within GFF2649 at 335.791 kb on + strand, within GFF2649 at 335.791 kb on + strand, within GFF2649 at 335.791 kb on + strand, within GFF2649 at 335.792 kb on - strand, within GFF2649 at 335.840 kb on + strand, within GFF2649 at 335.841 kb on - strand, within GFF2649 at 335.927 kb on - strand at 335.927 kb on - strand at 335.927 kb on - strand at 335.927 kb on - strand at 336.003 kb on + strand at 336.003 kb on + strand at 336.086 kb on + strand at 336.087 kb on - strand at 336.118 kb on - strand at 336.137 kb on - strand at 336.322 kb on + strand at 336.322 kb on + strand at 336.322 kb on + strand at 336.322 kb on + strand at 336.322 kb on + strand at 336.323 kb on - strand at 336.323 kb on - strand at 336.323 kb on - strand at 336.323 kb on - strand at 336.350 kb on - strand at 336.350 kb on - strand at 336.350 kb on - strand at 336.350 kb on - strand at 336.425 kb on + strand at 336.425 kb on + strand at 336.425 kb on + strand at 336.426 kb on - strand at 336.447 kb on - strand at 336.447 kb on - strand at 336.447 kb on - strand at 336.506 kb on + strand, within GFF2650 at 336.506 kb on + strand, within GFF2650 at 336.506 kb on + strand, within GFF2650 at 336.506 kb on + strand, within GFF2650 at 336.506 kb on + strand, within GFF2650 at 336.506 kb on + strand, within GFF2650 at 336.506 kb on + strand, within GFF2650 at 336.507 kb on - strand, within GFF2650 at 336.507 kb on - strand, within GFF2650 at 336.507 kb on - strand, within GFF2650 at 336.511 kb on - strand, within GFF2650 at 336.511 kb on - strand, within GFF2650 at 336.578 kb on + strand, within GFF2650 at 336.579 kb on - strand, within GFF2650 at 336.583 kb on + strand, within GFF2650 at 336.583 kb on + strand, within GFF2650 at 336.583 kb on + strand, within GFF2650 at 336.583 kb on + strand, within GFF2650 at 336.583 kb on + strand, within GFF2650 at 336.583 kb on + strand, within GFF2650 at 336.584 kb on - strand, within GFF2650 at 336.584 kb on - strand, within GFF2650 at 336.584 kb on - strand, within GFF2650 at 336.593 kb on + strand, within GFF2650 at 336.593 kb on + strand, within GFF2650 at 336.594 kb on - strand, within GFF2650 at 336.594 kb on - strand, within GFF2650 at 336.629 kb on + strand, within GFF2650 at 336.654 kb on + strand, within GFF2650 at 336.655 kb on - strand, within GFF2650 at 336.767 kb on + strand, within GFF2650 at 336.767 kb on + strand, within GFF2650 at 336.767 kb on + strand, within GFF2650 at 336.768 kb on - strand, within GFF2650 at 336.768 kb on - strand, within GFF2650 at 336.768 kb on - strand, within GFF2650 at 336.768 kb on - strand, within GFF2650 at 336.768 kb on - strand, within GFF2650 at 336.817 kb on + strand, within GFF2650 at 336.817 kb on + strand, within GFF2650 at 336.817 kb on + strand, within GFF2650 at 336.817 kb on + strand, within GFF2650 at 336.817 kb on + strand, within GFF2650 at 336.818 kb on - strand, within GFF2650 at 336.866 kb on + strand, within GFF2650 at 336.866 kb on + strand, within GFF2650 at 336.869 kb on + strand, within GFF2650 at 336.869 kb on + strand, within GFF2650 at 336.869 kb on + strand, within GFF2650 at 336.869 kb on + strand, within GFF2650 at 336.870 kb on - strand, within GFF2650 at 336.870 kb on - strand, within GFF2650 at 336.870 kb on - strand, within GFF2650 at 336.870 kb on - strand, within GFF2650 at 336.870 kb on - strand, within GFF2650 at 336.870 kb on - strand, within GFF2650 at 336.870 kb on - strand, within GFF2650 at 336.870 kb on - strand, within GFF2650 at 336.873 kb on - strand, within GFF2650 at 336.873 kb on - strand, within GFF2650 at 336.924 kb on + strand, within GFF2650 at 336.924 kb on + strand, within GFF2650 at 336.924 kb on + strand, within GFF2650 at 336.942 kb on - strand, within GFF2650 at 337.023 kb on + strand, within GFF2650 at 337.023 kb on + strand, within GFF2650 at 337.023 kb on + strand, within GFF2650 at 337.023 kb on + strand, within GFF2650 at 337.023 kb on + strand, within GFF2650 at 337.024 kb on - strand, within GFF2650 at 337.214 kb on + strand, within GFF2650 at 337.214 kb on + strand, within GFF2650 at 337.214 kb on + strand, within GFF2650 at 337.215 kb on - strand, within GFF2650 at 337.656 kb on + strand, within GFF2650 at 337.656 kb on + strand, within GFF2650 at 337.657 kb on - strand, within GFF2650 at 337.657 kb on - strand, within GFF2650 at 337.657 kb on - strand, within GFF2650 at 337.697 kb on + strand, within GFF2650 at 337.697 kb on + strand, within GFF2650 at 337.697 kb on + strand, within GFF2650 at 337.697 kb on + strand, within GFF2650 at 337.697 kb on + strand, within GFF2650 at 337.697 kb on + strand, within GFF2650 at 337.697 kb on + strand, within GFF2650 at 337.698 kb on - strand, within GFF2650 at 337.752 kb on - strand, within GFF2650 at 337.752 kb on - strand, within GFF2650 at 337.752 kb on - strand, within GFF2650 at 337.787 kb on + strand, within GFF2650 at 337.787 kb on + strand, within GFF2650 at 337.787 kb on + strand, within GFF2650 at 337.787 kb on + strand, within GFF2650 at 337.788 kb on - strand, within GFF2650 at 337.788 kb on - strand, within GFF2650 at 337.788 kb on - strand, within GFF2650 at 337.788 kb on - strand, within GFF2650 at 337.788 kb on - strand, within GFF2650 at 337.963 kb on + strand at 337.963 kb on + strand at 337.963 kb on + strand at 337.963 kb on + strand at 337.968 kb on - strand at 337.972 kb on + strand at 338.081 kb on - strand at 338.190 kb on + strand at 338.191 kb on - strand at 338.402 kb on + strand, within GFF2651 at 338.402 kb on + strand, within GFF2651 at 338.403 kb on - strand, within GFF2651 at 338.403 kb on - strand, within GFF2651 at 338.403 kb on - strand, within GFF2651 at 338.403 kb on - strand, within GFF2651 at 338.418 kb on - strand, within GFF2651 at 338.432 kb on + strand, within GFF2651 at 338.432 kb on + strand, within GFF2651 at 338.432 kb on + strand, within GFF2651 at 338.432 kb on + strand, within GFF2651 at 338.433 kb on - strand, within GFF2651 at 338.433 kb on - strand, within GFF2651 at 338.433 kb on - strand, within GFF2651 at 338.477 kb on + strand, within GFF2651 at 338.477 kb on + strand, within GFF2651 at 338.477 kb on + strand, within GFF2651 at 338.477 kb on + strand, within GFF2651 at 338.477 kb on + strand, within GFF2651 at 338.478 kb on - strand, within GFF2651 at 338.478 kb on - strand, within GFF2651 at 338.478 kb on - strand, within GFF2651 at 338.546 kb on + strand, within GFF2651 at 338.564 kb on + strand, within GFF2651 at 338.564 kb on + strand, within GFF2651 at 338.564 kb on + strand, within GFF2651 at 338.565 kb on - strand, within GFF2651 at 338.565 kb on - strand, within GFF2651 at 338.565 kb on - strand, within GFF2651 at 338.565 kb on - strand, within GFF2651 at 338.565 kb on - strand, within GFF2651 at 338.565 kb on - strand, within GFF2651 at 338.567 kb on + strand, within GFF2651 at 338.567 kb on + strand, within GFF2651 at 338.567 kb on + strand, within GFF2651 at 338.567 kb on + strand, within GFF2651 at 338.568 kb on - strand, within GFF2651 at 338.568 kb on - strand, within GFF2651 at 338.568 kb on - strand, within GFF2651 at 338.645 kb on + strand, within GFF2651 at 338.645 kb on + strand, within GFF2651 at 338.645 kb on + strand, within GFF2651 at 338.645 kb on + strand, within GFF2651 at 338.645 kb on + strand, within GFF2651 at 338.646 kb on - strand, within GFF2651 at 338.646 kb on - strand, within GFF2651 at 338.703 kb on + strand, within GFF2651 at 338.787 kb on - strand, within GFF2651 at 338.843 kb on + strand, within GFF2651 at 338.844 kb on - strand, within GFF2651 at 338.844 kb on - strand, within GFF2651 at 338.844 kb on - strand, within GFF2651 at 338.844 kb on - strand, within GFF2651 at 338.844 kb on - strand, within GFF2651 at 338.852 kb on + strand, within GFF2651 at 338.852 kb on + strand, within GFF2651 at 338.852 kb on + strand, within GFF2651 at 338.852 kb on + strand, within GFF2651 at 338.852 kb on + strand, within GFF2651 at 338.853 kb on - strand, within GFF2651 at 338.853 kb on - strand, within GFF2651 at 338.853 kb on - strand, within GFF2651 at 338.853 kb on - strand, within GFF2651 at 338.853 kb on - strand, within GFF2651 at 338.870 kb on - strand, within GFF2651 at 338.936 kb on + strand, within GFF2651 at 338.936 kb on + strand, within GFF2651 at 338.936 kb on + strand, within GFF2651 at 338.936 kb on + strand, within GFF2651 at 338.936 kb on + strand, within GFF2651 at 338.936 kb on + strand, within GFF2651 at 338.936 kb on + strand, within GFF2651 at 338.937 kb on - strand, within GFF2651 at 338.937 kb on - strand, within GFF2651 at 338.937 kb on - strand, within GFF2651 at 338.963 kb on + strand, within GFF2651
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 335,352 + +0.3 335,352 + +1.2 335,352 + +0.8 335,353 - -0.3 335,353 - -0.9 335,412 + +0.3 335,412 + +0.3 335,413 - +1.9 335,413 - +0.0 335,413 - +0.1 335,486 - GFF2649 0.16 -0.2 335,486 - GFF2649 0.16 -0.6 335,762 - GFF2649 0.67 +0.3 335,762 - GFF2649 0.67 -0.3 335,791 + GFF2649 0.72 +0.1 335,791 + GFF2649 0.72 +0.6 335,791 + GFF2649 0.72 -1.1 335,791 + GFF2649 0.72 +1.9 335,791 + GFF2649 0.72 +0.4 335,792 - GFF2649 0.72 +0.5 335,840 + GFF2649 0.81 -1.0 335,841 - GFF2649 0.81 -2.3 335,927 - -0.9 335,927 - +0.9 335,927 - +0.0 335,927 - -0.0 336,003 + +0.2 336,003 + -0.7 336,086 + -0.3 336,087 - -0.1 336,118 - +0.2 336,137 - -0.1 336,322 + -0.8 336,322 + +0.4 336,322 + +0.3 336,322 + -0.8 336,322 + +0.8 336,323 - +0.4 336,323 - +0.3 336,323 - +0.3 336,323 - -0.8 336,350 - -0.1 336,350 - +1.1 336,350 - -1.4 336,350 - +1.0 336,425 + -1.0 336,425 + +0.4 336,425 + +0.5 336,426 - -0.9 336,447 - +0.4 336,447 - -0.2 336,447 - -0.6 336,506 + GFF2650 0.10 +1.9 336,506 + GFF2650 0.10 -0.3 336,506 + GFF2650 0.10 -0.7 336,506 + GFF2650 0.10 +0.6 336,506 + GFF2650 0.10 +0.1 336,506 + GFF2650 0.10 +0.4 336,506 + GFF2650 0.10 +0.7 336,507 - GFF2650 0.10 +0.2 336,507 - GFF2650 0.10 +0.1 336,507 - GFF2650 0.10 +1.0 336,511 - GFF2650 0.10 -0.1 336,511 - GFF2650 0.10 +0.3 336,578 + GFF2650 0.15 +0.8 336,579 - GFF2650 0.15 +0.8 336,583 + GFF2650 0.15 +1.3 336,583 + GFF2650 0.15 -1.3 336,583 + GFF2650 0.15 -0.3 336,583 + GFF2650 0.15 -1.5 336,583 + GFF2650 0.15 +0.8 336,583 + GFF2650 0.15 +0.9 336,584 - GFF2650 0.15 +0.2 336,584 - GFF2650 0.15 +0.4 336,584 - GFF2650 0.15 -0.0 336,593 + GFF2650 0.15 +1.2 336,593 + GFF2650 0.15 -0.3 336,594 - GFF2650 0.16 -0.1 336,594 - GFF2650 0.16 +0.5 336,629 + GFF2650 0.18 -0.2 336,654 + GFF2650 0.19 +0.1 336,655 - GFF2650 0.19 +0.4 336,767 + GFF2650 0.26 -1.2 336,767 + GFF2650 0.26 -0.0 336,767 + GFF2650 0.26 +0.3 336,768 - GFF2650 0.26 -1.2 336,768 - GFF2650 0.26 -0.4 336,768 - GFF2650 0.26 -0.6 336,768 - GFF2650 0.26 +0.2 336,768 - GFF2650 0.26 -0.2 336,817 + GFF2650 0.29 -0.7 336,817 + GFF2650 0.29 -1.1 336,817 + GFF2650 0.29 -0.3 336,817 + GFF2650 0.29 -0.2 336,817 + GFF2650 0.29 -2.1 336,818 - GFF2650 0.29 -1.9 336,866 + GFF2650 0.32 -1.7 336,866 + GFF2650 0.32 +0.3 336,869 + GFF2650 0.32 +0.6 336,869 + GFF2650 0.32 -0.6 336,869 + GFF2650 0.32 +0.5 336,869 + GFF2650 0.32 -0.6 336,870 - GFF2650 0.32 -0.5 336,870 - GFF2650 0.32 -0.1 336,870 - GFF2650 0.32 -0.1 336,870 - GFF2650 0.32 -0.8 336,870 - GFF2650 0.32 -0.8 336,870 - GFF2650 0.32 -0.5 336,870 - GFF2650 0.32 +0.8 336,870 - GFF2650 0.32 +1.2 336,873 - GFF2650 0.33 -0.8 336,873 - GFF2650 0.33 -0.5 336,924 + GFF2650 0.36 +0.1 336,924 + GFF2650 0.36 +0.7 336,924 + GFF2650 0.36 +0.4 336,942 - GFF2650 0.37 +0.2 337,023 + GFF2650 0.42 -0.9 337,023 + GFF2650 0.42 -0.4 337,023 + GFF2650 0.42 -0.8 337,023 + GFF2650 0.42 -0.6 337,023 + GFF2650 0.42 -0.3 337,024 - GFF2650 0.42 +1.3 337,214 + GFF2650 0.54 -2.4 337,214 + GFF2650 0.54 -0.7 337,214 + GFF2650 0.54 -0.6 337,215 - GFF2650 0.54 +0.2 337,656 + GFF2650 0.81 +0.4 337,656 + GFF2650 0.81 -0.5 337,657 - GFF2650 0.81 -0.4 337,657 - GFF2650 0.81 -0.0 337,657 - GFF2650 0.81 +0.8 337,697 + GFF2650 0.83 -1.7 337,697 + GFF2650 0.83 -0.3 337,697 + GFF2650 0.83 -0.5 337,697 + GFF2650 0.83 -0.4 337,697 + GFF2650 0.83 +0.2 337,697 + GFF2650 0.83 +0.5 337,697 + GFF2650 0.83 +0.2 337,698 - GFF2650 0.83 -0.8 337,752 - GFF2650 0.87 +0.5 337,752 - GFF2650 0.87 -0.5 337,752 - GFF2650 0.87 +0.4 337,787 + GFF2650 0.89 +0.2 337,787 + GFF2650 0.89 -0.4 337,787 + GFF2650 0.89 +1.0 337,787 + GFF2650 0.89 +1.9 337,788 - GFF2650 0.89 -0.2 337,788 - GFF2650 0.89 +1.2 337,788 - GFF2650 0.89 -0.1 337,788 - GFF2650 0.89 -1.3 337,788 - GFF2650 0.89 -0.7 337,963 + -0.5 337,963 + -0.6 337,963 + +0.3 337,963 + +0.1 337,968 - -0.1 337,972 + -0.2 338,081 - +1.2 338,190 + -0.7 338,191 - +0.1 338,402 + GFF2651 0.11 -1.0 338,402 + GFF2651 0.11 +0.1 338,403 - GFF2651 0.11 -0.8 338,403 - GFF2651 0.11 -0.1 338,403 - GFF2651 0.11 -0.6 338,403 - GFF2651 0.11 -0.9 338,418 - GFF2651 0.12 -0.5 338,432 + GFF2651 0.13 -0.7 338,432 + GFF2651 0.13 -1.6 338,432 + GFF2651 0.13 -1.0 338,432 + GFF2651 0.13 -0.8 338,433 - GFF2651 0.13 -0.2 338,433 - GFF2651 0.13 -0.2 338,433 - GFF2651 0.13 -1.3 338,477 + GFF2651 0.16 -0.7 338,477 + GFF2651 0.16 -0.1 338,477 + GFF2651 0.16 +1.2 338,477 + GFF2651 0.16 -0.4 338,477 + GFF2651 0.16 +1.0 338,478 - GFF2651 0.16 -0.1 338,478 - GFF2651 0.16 -0.7 338,478 - GFF2651 0.16 -0.4 338,546 + GFF2651 0.20 -0.7 338,564 + GFF2651 0.21 +0.2 338,564 + GFF2651 0.21 +1.4 338,564 + GFF2651 0.21 +0.7 338,565 - GFF2651 0.21 -0.7 338,565 - GFF2651 0.21 -1.1 338,565 - GFF2651 0.21 -1.2 338,565 - GFF2651 0.21 -0.4 338,565 - GFF2651 0.21 +0.1 338,565 - GFF2651 0.21 -0.2 338,567 + GFF2651 0.21 +1.3 338,567 + GFF2651 0.21 +0.5 338,567 + GFF2651 0.21 +0.0 338,567 + GFF2651 0.21 +0.4 338,568 - GFF2651 0.21 +0.1 338,568 - GFF2651 0.21 -0.5 338,568 - GFF2651 0.21 -0.7 338,645 + GFF2651 0.25 -1.0 338,645 + GFF2651 0.25 -0.2 338,645 + GFF2651 0.25 -0.5 338,645 + GFF2651 0.25 -1.0 338,645 + GFF2651 0.25 -0.1 338,646 - GFF2651 0.25 -0.1 338,646 - GFF2651 0.25 -1.4 338,703 + GFF2651 0.29 -0.5 338,787 - GFF2651 0.34 -0.7 338,843 + GFF2651 0.37 -0.6 338,844 - GFF2651 0.37 -0.0 338,844 - GFF2651 0.37 -0.2 338,844 - GFF2651 0.37 +0.2 338,844 - GFF2651 0.37 -1.0 338,844 - GFF2651 0.37 -0.6 338,852 + GFF2651 0.37 -2.0 338,852 + GFF2651 0.37 -0.1 338,852 + GFF2651 0.37 -1.1 338,852 + GFF2651 0.37 -0.1 338,852 + GFF2651 0.37 +0.7 338,853 - GFF2651 0.38 +0.6 338,853 - GFF2651 0.38 +0.1 338,853 - GFF2651 0.38 -0.3 338,853 - GFF2651 0.38 +0.7 338,853 - GFF2651 0.38 +0.5 338,870 - GFF2651 0.39 -1.0 338,936 + GFF2651 0.42 -0.6 338,936 + GFF2651 0.42 -0.4 338,936 + GFF2651 0.42 -0.9 338,936 + GFF2651 0.42 +0.7 338,936 + GFF2651 0.42 -0.4 338,936 + GFF2651 0.42 -0.5 338,936 + GFF2651 0.42 +0.4 338,937 - GFF2651 0.42 -0.8 338,937 - GFF2651 0.42 -1.2 338,937 - GFF2651 0.42 +1.5 338,963 + GFF2651 0.44 -0.5
Or see this region's nucleotide sequence