Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2270 and GFF2271 are separated by 166 nucleotides GFF2271 and GFF2272 are separated by 24 nucleotides GFF2272 and GFF2273 are separated by 70 nucleotides GFF2273 and GFF2274 are separated by 22 nucleotides GFF2274 and GFF2275 are separated by 15 nucleotides
GFF2270 - hypothetical protein, at 981,076 to 981,348
GFF2270
GFF2271 - Prolyl-tRNA editing protein ProX, at 981,515 to 982,024
GFF2271
GFF2272 - hypothetical protein, at 982,049 to 982,675
GFF2272
GFF2273 - hypothetical protein, at 982,746 to 983,300
GFF2273
GFF2274 - hypothetical protein, at 983,323 to 983,559
GFF2274
GFF2275 - hypothetical protein, at 983,575 to 984,009
GFF2275
Position (kb) 982
983 Strain fitness (log2 ratio) -1
0
1
2 at 981.193 kb on + strand, within GFF2270 at 981.479 kb on - strand at 981.479 kb on - strand at 981.479 kb on - strand at 981.578 kb on + strand, within GFF2271 at 981.579 kb on - strand, within GFF2271 at 981.579 kb on - strand, within GFF2271 at 981.683 kb on + strand, within GFF2271 at 981.683 kb on + strand, within GFF2271 at 981.684 kb on - strand, within GFF2271 at 981.684 kb on - strand, within GFF2271 at 981.709 kb on + strand, within GFF2271 at 981.751 kb on + strand, within GFF2271 at 981.752 kb on - strand, within GFF2271 at 981.845 kb on - strand, within GFF2271 at 982.034 kb on - strand at 982.034 kb on - strand at 982.164 kb on + strand, within GFF2272 at 982.165 kb on - strand, within GFF2272 at 982.459 kb on - strand, within GFF2272 at 983.312 kb on - strand at 983.558 kb on - strand at 983.606 kb on + strand at 983.637 kb on + strand, within GFF2275 at 983.638 kb on - strand, within GFF2275 at 983.638 kb on - strand, within GFF2275
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 981,193 + GFF2270 0.43 +0.5 981,479 - +0.5 981,479 - +1.6 981,479 - -0.3 981,578 + GFF2271 0.12 -0.0 981,579 - GFF2271 0.13 +0.4 981,579 - GFF2271 0.13 +0.4 981,683 + GFF2271 0.33 +0.2 981,683 + GFF2271 0.33 +0.5 981,684 - GFF2271 0.33 -0.7 981,684 - GFF2271 0.33 -1.4 981,709 + GFF2271 0.38 +0.3 981,751 + GFF2271 0.46 -0.3 981,752 - GFF2271 0.46 +0.4 981,845 - GFF2271 0.65 +0.8 982,034 - +0.0 982,034 - +0.9 982,164 + GFF2272 0.18 -1.5 982,165 - GFF2272 0.19 -0.5 982,459 - GFF2272 0.65 -0.4 983,312 - -0.5 983,558 - +0.1 983,606 + +0.0 983,637 + GFF2275 0.14 +1.9 983,638 - GFF2275 0.14 +0.6 983,638 - GFF2275 0.14 -1.3
Or see this region's nucleotide sequence