Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2204 and GFF2205 are separated by 149 nucleotides GFF2205 and GFF2206 are separated by 56 nucleotides GFF2206 and GFF2207 are separated by 385 nucleotides
GFF2204 - hypothetical protein, at 906,277 to 907,821
GFF2204
GFF2205 - IS1182 family transposase ISMno9, at 907,971 to 908,636
GFF2205
GFF2206 - Dihydroxyacetone kinase, at 908,693 to 910,330
GFF2206
GFF2207 - hypothetical protein, at 910,716 to 910,946
GFF2207
Position (kb) 908
909
910
911 Strain fitness (log2 ratio) -1
0
1
2 at 907.726 kb on + strand at 907.726 kb on + strand at 907.727 kb on - strand at 907.727 kb on - strand at 907.782 kb on + strand at 907.782 kb on + strand at 907.782 kb on + strand at 907.783 kb on - strand at 907.783 kb on - strand at 907.783 kb on - strand at 907.793 kb on + strand at 907.793 kb on + strand at 907.794 kb on - strand at 907.794 kb on - strand at 908.005 kb on + strand at 908.005 kb on + strand at 908.005 kb on + strand at 908.005 kb on + strand at 908.005 kb on + strand at 908.006 kb on - strand at 908.006 kb on - strand at 908.017 kb on + strand at 908.062 kb on + strand, within GFF2205 at 908.102 kb on + strand, within GFF2205 at 908.102 kb on + strand, within GFF2205 at 908.102 kb on + strand, within GFF2205 at 908.102 kb on + strand, within GFF2205 at 908.102 kb on + strand, within GFF2205 at 908.103 kb on - strand, within GFF2205 at 908.103 kb on - strand, within GFF2205 at 908.103 kb on - strand, within GFF2205 at 908.103 kb on - strand, within GFF2205 at 908.113 kb on - strand, within GFF2205 at 908.176 kb on - strand, within GFF2205 at 908.236 kb on - strand, within GFF2205 at 908.436 kb on + strand, within GFF2205 at 908.511 kb on + strand, within GFF2205 at 908.512 kb on - strand, within GFF2205 at 908.678 kb on + strand at 908.782 kb on - strand at 908.782 kb on - strand at 908.782 kb on - strand at 908.782 kb on - strand at 908.943 kb on + strand, within GFF2206 at 908.943 kb on + strand, within GFF2206 at 909.041 kb on + strand, within GFF2206 at 909.042 kb on - strand, within GFF2206 at 909.042 kb on - strand, within GFF2206 at 909.042 kb on - strand, within GFF2206 at 909.319 kb on + strand, within GFF2206 at 909.320 kb on - strand, within GFF2206 at 909.383 kb on - strand, within GFF2206 at 910.314 kb on + strand at 910.315 kb on - strand at 910.315 kb on - strand at 910.315 kb on - strand at 910.324 kb on + strand at 910.324 kb on + strand at 910.325 kb on - strand at 910.364 kb on - strand at 910.381 kb on + strand at 910.570 kb on + strand at 910.570 kb on + strand at 910.570 kb on + strand at 910.570 kb on + strand at 910.570 kb on + strand at 910.570 kb on + strand at 910.570 kb on + strand at 910.571 kb on - strand at 910.839 kb on - strand, within GFF2207 at 910.936 kb on + strand at 910.937 kb on - strand at 910.944 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 907,726 + +0.7 907,726 + -0.1 907,727 - -0.4 907,727 - +0.2 907,782 + -1.1 907,782 + +0.1 907,782 + +0.8 907,783 - -0.8 907,783 - +0.6 907,783 - +0.0 907,793 + -0.5 907,793 + -1.1 907,794 - +0.2 907,794 - -0.2 908,005 + +0.2 908,005 + -1.1 908,005 + -0.0 908,005 + -0.7 908,005 + +0.9 908,006 - -0.1 908,006 - -0.6 908,017 + -1.2 908,062 + GFF2205 0.14 +0.6 908,102 + GFF2205 0.20 -0.1 908,102 + GFF2205 0.20 -0.1 908,102 + GFF2205 0.20 -0.7 908,102 + GFF2205 0.20 -0.3 908,102 + GFF2205 0.20 +0.4 908,103 - GFF2205 0.20 -0.5 908,103 - GFF2205 0.20 -0.0 908,103 - GFF2205 0.20 -1.1 908,103 - GFF2205 0.20 +0.2 908,113 - GFF2205 0.21 -0.3 908,176 - GFF2205 0.31 -0.9 908,236 - GFF2205 0.40 -0.3 908,436 + GFF2205 0.70 +1.0 908,511 + GFF2205 0.81 +0.4 908,512 - GFF2205 0.81 -0.3 908,678 + -0.7 908,782 - -1.4 908,782 - +0.8 908,782 - -0.3 908,782 - +0.3 908,943 + GFF2206 0.15 +0.9 908,943 + GFF2206 0.15 +1.5 909,041 + GFF2206 0.21 -0.6 909,042 - GFF2206 0.21 -0.5 909,042 - GFF2206 0.21 -1.0 909,042 - GFF2206 0.21 +1.0 909,319 + GFF2206 0.38 -0.5 909,320 - GFF2206 0.38 +0.2 909,383 - GFF2206 0.42 -0.6 910,314 + +0.3 910,315 - +0.3 910,315 - -0.7 910,315 - -0.4 910,324 + -0.8 910,324 + -0.6 910,325 - -0.1 910,364 - -0.5 910,381 + -0.0 910,570 + +0.1 910,570 + +0.8 910,570 + +0.9 910,570 + +0.5 910,570 + -0.2 910,570 + -0.8 910,570 + -0.3 910,571 - -0.5 910,839 - GFF2207 0.53 -1.3 910,936 + +0.2 910,937 - -0.6 910,944 + +2.1
Or see this region's nucleotide sequence