Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2204 and GFF2205 are separated by 149 nucleotides GFF2205 and GFF2206 are separated by 56 nucleotides
GFF2204 - hypothetical protein, at 906,277 to 907,821
GFF2204
GFF2205 - IS1182 family transposase ISMno9, at 907,971 to 908,636
GFF2205
GFF2206 - Dihydroxyacetone kinase, at 908,693 to 910,330
GFF2206
Position (kb) 907
908
909 Strain fitness (log2 ratio) -1
0
1 at 907.366 kb on + strand, within GFF2204 at 907.366 kb on + strand, within GFF2204 at 907.367 kb on - strand, within GFF2204 at 907.367 kb on - strand, within GFF2204 at 907.367 kb on - strand, within GFF2204 at 907.532 kb on + strand, within GFF2204 at 907.532 kb on + strand, within GFF2204 at 907.532 kb on + strand, within GFF2204 at 907.532 kb on + strand, within GFF2204 at 907.533 kb on - strand, within GFF2204 at 907.533 kb on - strand, within GFF2204 at 907.535 kb on + strand, within GFF2204 at 907.536 kb on - strand, within GFF2204 at 907.541 kb on - strand, within GFF2204 at 907.588 kb on + strand, within GFF2204 at 907.627 kb on + strand, within GFF2204 at 907.627 kb on + strand, within GFF2204 at 907.627 kb on + strand, within GFF2204 at 907.628 kb on - strand, within GFF2204 at 907.666 kb on + strand, within GFF2204 at 907.667 kb on - strand at 907.667 kb on - strand at 907.667 kb on - strand at 907.726 kb on + strand at 907.726 kb on + strand at 907.727 kb on - strand at 907.727 kb on - strand at 907.782 kb on + strand at 907.782 kb on + strand at 907.782 kb on + strand at 907.783 kb on - strand at 907.783 kb on - strand at 907.783 kb on - strand at 907.793 kb on + strand at 907.793 kb on + strand at 907.794 kb on - strand at 907.794 kb on - strand at 908.005 kb on + strand at 908.005 kb on + strand at 908.005 kb on + strand at 908.005 kb on + strand at 908.005 kb on + strand at 908.006 kb on - strand at 908.006 kb on - strand at 908.017 kb on + strand at 908.062 kb on + strand, within GFF2205 at 908.102 kb on + strand, within GFF2205 at 908.102 kb on + strand, within GFF2205 at 908.102 kb on + strand, within GFF2205 at 908.102 kb on + strand, within GFF2205 at 908.102 kb on + strand, within GFF2205 at 908.103 kb on - strand, within GFF2205 at 908.103 kb on - strand, within GFF2205 at 908.103 kb on - strand, within GFF2205 at 908.103 kb on - strand, within GFF2205 at 908.113 kb on - strand, within GFF2205 at 908.176 kb on - strand, within GFF2205 at 908.236 kb on - strand, within GFF2205 at 908.436 kb on + strand, within GFF2205 at 908.511 kb on + strand, within GFF2205 at 908.512 kb on - strand, within GFF2205 at 908.678 kb on + strand at 908.782 kb on - strand at 908.782 kb on - strand at 908.782 kb on - strand at 908.782 kb on - strand at 908.943 kb on + strand, within GFF2206 at 908.943 kb on + strand, within GFF2206 at 909.041 kb on + strand, within GFF2206 at 909.042 kb on - strand, within GFF2206 at 909.042 kb on - strand, within GFF2206 at 909.042 kb on - strand, within GFF2206 at 909.319 kb on + strand, within GFF2206 at 909.320 kb on - strand, within GFF2206 at 909.383 kb on - strand, within GFF2206
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 907,366 + GFF2204 0.70 -0.9 907,366 + GFF2204 0.70 +0.5 907,367 - GFF2204 0.71 -0.2 907,367 - GFF2204 0.71 -0.6 907,367 - GFF2204 0.71 +0.1 907,532 + GFF2204 0.81 -0.4 907,532 + GFF2204 0.81 +0.6 907,532 + GFF2204 0.81 +0.7 907,532 + GFF2204 0.81 -0.3 907,533 - GFF2204 0.81 -0.3 907,533 - GFF2204 0.81 -0.7 907,535 + GFF2204 0.81 +0.4 907,536 - GFF2204 0.81 +0.4 907,541 - GFF2204 0.82 -1.0 907,588 + GFF2204 0.85 +0.3 907,627 + GFF2204 0.87 -0.1 907,627 + GFF2204 0.87 +0.3 907,627 + GFF2204 0.87 -0.4 907,628 - GFF2204 0.87 +0.4 907,666 + GFF2204 0.90 +0.6 907,667 - +0.9 907,667 - -0.7 907,667 - -0.6 907,726 + +0.7 907,726 + -0.1 907,727 - -0.4 907,727 - +0.2 907,782 + -1.1 907,782 + +0.1 907,782 + +0.8 907,783 - -0.8 907,783 - +0.6 907,783 - +0.0 907,793 + -0.5 907,793 + -1.1 907,794 - +0.2 907,794 - -0.2 908,005 + +0.2 908,005 + -1.1 908,005 + -0.0 908,005 + -0.7 908,005 + +0.9 908,006 - -0.1 908,006 - -0.6 908,017 + -1.2 908,062 + GFF2205 0.14 +0.6 908,102 + GFF2205 0.20 -0.1 908,102 + GFF2205 0.20 -0.1 908,102 + GFF2205 0.20 -0.7 908,102 + GFF2205 0.20 -0.3 908,102 + GFF2205 0.20 +0.4 908,103 - GFF2205 0.20 -0.5 908,103 - GFF2205 0.20 -0.0 908,103 - GFF2205 0.20 -1.1 908,103 - GFF2205 0.20 +0.2 908,113 - GFF2205 0.21 -0.3 908,176 - GFF2205 0.31 -0.9 908,236 - GFF2205 0.40 -0.3 908,436 + GFF2205 0.70 +1.0 908,511 + GFF2205 0.81 +0.4 908,512 - GFF2205 0.81 -0.3 908,678 + -0.7 908,782 - -1.4 908,782 - +0.8 908,782 - -0.3 908,782 - +0.3 908,943 + GFF2206 0.15 +0.9 908,943 + GFF2206 0.15 +1.5 909,041 + GFF2206 0.21 -0.6 909,042 - GFF2206 0.21 -0.5 909,042 - GFF2206 0.21 -1.0 909,042 - GFF2206 0.21 +1.0 909,319 + GFF2206 0.38 -0.5 909,320 - GFF2206 0.38 +0.2 909,383 - GFF2206 0.42 -0.6
Or see this region's nucleotide sequence