Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2200 and GFF2201 are separated by 2 nucleotides GFF2201 and GFF2202 are separated by 931 nucleotides
GFF2200 - hypothetical protein, at 899,090 to 902,104
GFF2200
GFF2201 - hypothetical protein, at 902,107 to 902,847
GFF2201
GFF2202 - hypothetical protein, at 903,779 to 905,614
GFF2202
Position (kb) 902
903 Strain fitness (log2 ratio) -2
-1
0
1 at 901.146 kb on - strand, within GFF2200 at 901.146 kb on - strand, within GFF2200 at 901.491 kb on - strand, within GFF2200 at 901.491 kb on - strand, within GFF2200 at 901.491 kb on - strand, within GFF2200 at 901.500 kb on - strand, within GFF2200 at 901.660 kb on - strand, within GFF2200 at 901.704 kb on - strand, within GFF2200 at 901.744 kb on + strand, within GFF2200 at 901.744 kb on + strand, within GFF2200 at 901.744 kb on + strand, within GFF2200 at 901.744 kb on + strand, within GFF2200 at 901.745 kb on - strand, within GFF2200 at 901.745 kb on - strand, within GFF2200 at 901.745 kb on - strand, within GFF2200 at 901.745 kb on - strand, within GFF2200 at 901.762 kb on + strand, within GFF2200 at 901.762 kb on + strand, within GFF2200 at 901.762 kb on + strand, within GFF2200 at 901.762 kb on + strand, within GFF2200 at 901.762 kb on + strand, within GFF2200 at 901.763 kb on - strand, within GFF2200 at 901.763 kb on - strand, within GFF2200 at 901.763 kb on - strand, within GFF2200 at 901.937 kb on + strand at 902.051 kb on + strand at 902.075 kb on + strand at 902.075 kb on + strand at 902.075 kb on + strand at 902.076 kb on - strand at 902.143 kb on + strand at 902.144 kb on - strand at 902.144 kb on - strand at 902.144 kb on - strand at 902.329 kb on + strand, within GFF2201 at 902.689 kb on + strand, within GFF2201 at 902.689 kb on + strand, within GFF2201 at 902.690 kb on - strand, within GFF2201 at 902.763 kb on + strand, within GFF2201 at 902.763 kb on + strand, within GFF2201 at 902.763 kb on + strand, within GFF2201 at 902.763 kb on + strand, within GFF2201 at 902.763 kb on + strand, within GFF2201 at 902.764 kb on - strand, within GFF2201 at 902.764 kb on - strand, within GFF2201 at 902.764 kb on - strand, within GFF2201 at 902.764 kb on - strand, within GFF2201 at 902.765 kb on + strand, within GFF2201 at 902.765 kb on + strand, within GFF2201 at 902.766 kb on - strand, within GFF2201 at 902.859 kb on - strand at 902.860 kb on + strand at 902.860 kb on + strand at 902.860 kb on + strand at 902.861 kb on - strand at 902.861 kb on - strand at 902.861 kb on - strand at 902.861 kb on - strand at 902.861 kb on - strand at 902.979 kb on + strand at 903.001 kb on - strand at 903.001 kb on - strand at 903.001 kb on - strand at 903.044 kb on + strand at 903.083 kb on - strand at 903.086 kb on - strand at 903.168 kb on - strand at 903.169 kb on + strand at 903.169 kb on + strand at 903.169 kb on + strand at 903.169 kb on + strand at 903.170 kb on - strand at 903.192 kb on - strand at 903.192 kb on - strand at 903.232 kb on + strand at 903.232 kb on + strand at 903.233 kb on - strand at 903.233 kb on - strand at 903.242 kb on + strand at 903.371 kb on - strand at 903.371 kb on - strand at 903.464 kb on + strand at 903.465 kb on - strand at 903.465 kb on - strand at 903.622 kb on - strand at 903.622 kb on - strand at 903.622 kb on - strand at 903.708 kb on - strand at 903.764 kb on + strand at 903.764 kb on + strand at 903.765 kb on - strand at 903.765 kb on - strand at 903.765 kb on - strand at 903.773 kb on - strand at 903.773 kb on - strand at 903.778 kb on + strand at 903.779 kb on - strand at 903.779 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 901,146 - GFF2200 0.68 +0.5 901,146 - GFF2200 0.68 +1.7 901,491 - GFF2200 0.80 -0.5 901,491 - GFF2200 0.80 -0.1 901,491 - GFF2200 0.80 +0.2 901,500 - GFF2200 0.80 +0.0 901,660 - GFF2200 0.85 +0.5 901,704 - GFF2200 0.87 +0.3 901,744 + GFF2200 0.88 +1.3 901,744 + GFF2200 0.88 +0.4 901,744 + GFF2200 0.88 -0.8 901,744 + GFF2200 0.88 -0.9 901,745 - GFF2200 0.88 +0.7 901,745 - GFF2200 0.88 -0.1 901,745 - GFF2200 0.88 +1.2 901,745 - GFF2200 0.88 -0.7 901,762 + GFF2200 0.89 -0.5 901,762 + GFF2200 0.89 -0.8 901,762 + GFF2200 0.89 +0.4 901,762 + GFF2200 0.89 -0.2 901,762 + GFF2200 0.89 +0.4 901,763 - GFF2200 0.89 -0.4 901,763 - GFF2200 0.89 -0.5 901,763 - GFF2200 0.89 +0.0 901,937 + +0.8 902,051 + -0.7 902,075 + -0.5 902,075 + -0.9 902,075 + -0.4 902,076 - +0.3 902,143 + -0.3 902,144 - +0.1 902,144 - +0.1 902,144 - +0.4 902,329 + GFF2201 0.30 -2.0 902,689 + GFF2201 0.79 +0.3 902,689 + GFF2201 0.79 +0.1 902,690 - GFF2201 0.79 +0.9 902,763 + GFF2201 0.89 -1.2 902,763 + GFF2201 0.89 +0.2 902,763 + GFF2201 0.89 -0.1 902,763 + GFF2201 0.89 +0.3 902,763 + GFF2201 0.89 -0.7 902,764 - GFF2201 0.89 -1.8 902,764 - GFF2201 0.89 +0.3 902,764 - GFF2201 0.89 -1.3 902,764 - GFF2201 0.89 -0.7 902,765 + GFF2201 0.89 -0.1 902,765 + GFF2201 0.89 +0.4 902,766 - GFF2201 0.89 -0.1 902,859 - -0.8 902,860 + +0.3 902,860 + -0.6 902,860 + -0.4 902,861 - -0.2 902,861 - -0.3 902,861 - -0.0 902,861 - -0.7 902,861 - -0.2 902,979 + -0.5 903,001 - +0.9 903,001 - +0.4 903,001 - +1.0 903,044 + +1.3 903,083 - +0.2 903,086 - -0.9 903,168 - +0.5 903,169 + +0.7 903,169 + -0.9 903,169 + -0.4 903,169 + +0.1 903,170 - -1.0 903,192 - -0.1 903,192 - -0.0 903,232 + -0.7 903,232 + +0.1 903,233 - +1.0 903,233 - +1.0 903,242 + -0.7 903,371 - +0.9 903,371 - -0.1 903,464 + +0.3 903,465 - +0.9 903,465 - +0.8 903,622 - -0.1 903,622 - +0.2 903,622 - -0.5 903,708 - -0.3 903,764 + +0.7 903,764 + -0.4 903,765 - -0.1 903,765 - +0.7 903,765 - -0.3 903,773 - +1.0 903,773 - -0.5 903,778 + -0.4 903,779 - -0.8 903,779 - +0.7
Or see this region's nucleotide sequence