Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2164 and GFF2165 are separated by 15 nucleotides GFF2165 and GFF2166 are separated by 7 nucleotides
GFF2164 - Macrolide export protein MacA, at 859,210 to 860,502
GFF2164
GFF2165 - Macrolide export ATP-binding/permease protein MacB, at 860,518 to 862,533
GFF2165
GFF2166 - hypothetical protein, at 862,541 to 863,398
GFF2166
Position (kb) 860
861
862
863 Strain fitness (log2 ratio) -1
0
1
2 at 859.606 kb on - strand, within GFF2164 at 860.041 kb on + strand, within GFF2164 at 860.041 kb on + strand, within GFF2164 at 860.041 kb on + strand, within GFF2164 at 860.042 kb on - strand, within GFF2164 at 860.042 kb on - strand, within GFF2164 at 860.042 kb on - strand, within GFF2164 at 860.042 kb on - strand, within GFF2164 at 860.161 kb on + strand, within GFF2164 at 860.161 kb on + strand, within GFF2164 at 860.162 kb on - strand, within GFF2164 at 860.164 kb on + strand, within GFF2164 at 860.165 kb on - strand, within GFF2164 at 860.165 kb on - strand, within GFF2164 at 860.212 kb on + strand, within GFF2164 at 860.212 kb on + strand, within GFF2164 at 860.212 kb on + strand, within GFF2164 at 860.212 kb on + strand, within GFF2164 at 860.212 kb on + strand, within GFF2164 at 860.212 kb on + strand, within GFF2164 at 860.213 kb on - strand, within GFF2164 at 860.213 kb on - strand, within GFF2164 at 860.213 kb on - strand, within GFF2164 at 860.213 kb on - strand, within GFF2164 at 860.213 kb on - strand, within GFF2164 at 860.500 kb on + strand at 860.500 kb on + strand at 860.501 kb on - strand at 860.501 kb on - strand at 860.501 kb on - strand at 860.501 kb on - strand at 860.764 kb on + strand, within GFF2165 at 860.908 kb on + strand, within GFF2165 at 861.613 kb on + strand, within GFF2165 at 861.613 kb on + strand, within GFF2165 at 861.613 kb on + strand, within GFF2165 at 861.614 kb on - strand, within GFF2165 at 861.614 kb on - strand, within GFF2165 at 861.614 kb on - strand, within GFF2165 at 861.614 kb on - strand, within GFF2165 at 861.614 kb on - strand, within GFF2165 at 861.614 kb on - strand, within GFF2165 at 861.614 kb on - strand, within GFF2165 at 861.614 kb on - strand, within GFF2165 at 861.943 kb on + strand, within GFF2165 at 861.952 kb on + strand, within GFF2165 at 861.952 kb on + strand, within GFF2165 at 861.952 kb on + strand, within GFF2165 at 861.952 kb on + strand, within GFF2165 at 861.953 kb on - strand, within GFF2165 at 861.953 kb on - strand, within GFF2165 at 862.384 kb on + strand at 862.411 kb on + strand at 862.411 kb on + strand at 862.411 kb on + strand at 862.412 kb on - strand at 862.412 kb on - strand at 862.474 kb on + strand at 862.475 kb on - strand at 862.475 kb on - strand at 862.809 kb on + strand, within GFF2166 at 862.825 kb on - strand, within GFF2166 at 862.869 kb on + strand, within GFF2166 at 863.202 kb on + strand, within GFF2166 at 863.203 kb on - strand, within GFF2166 at 863.256 kb on + strand, within GFF2166 at 863.257 kb on - strand, within GFF2166 at 863.257 kb on - strand, within GFF2166 at 863.257 kb on - strand, within GFF2166 at 863.257 kb on - strand, within GFF2166 at 863.285 kb on - strand, within GFF2166 at 863.379 kb on + strand at 863.379 kb on + strand at 863.520 kb on - strand at 863.521 kb on + strand at 863.522 kb on - strand at 863.530 kb on + strand at 863.531 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 859,606 - GFF2164 0.31 +0.6 860,041 + GFF2164 0.64 -0.7 860,041 + GFF2164 0.64 +0.7 860,041 + GFF2164 0.64 +0.1 860,042 - GFF2164 0.64 -0.8 860,042 - GFF2164 0.64 -1.3 860,042 - GFF2164 0.64 -0.2 860,042 - GFF2164 0.64 -0.3 860,161 + GFF2164 0.74 +0.2 860,161 + GFF2164 0.74 +0.3 860,162 - GFF2164 0.74 +0.2 860,164 + GFF2164 0.74 -0.4 860,165 - GFF2164 0.74 +1.5 860,165 - GFF2164 0.74 +0.1 860,212 + GFF2164 0.77 +1.0 860,212 + GFF2164 0.77 -0.0 860,212 + GFF2164 0.77 -0.9 860,212 + GFF2164 0.77 +0.5 860,212 + GFF2164 0.77 -1.5 860,212 + GFF2164 0.77 +0.2 860,213 - GFF2164 0.78 -0.2 860,213 - GFF2164 0.78 -1.3 860,213 - GFF2164 0.78 +0.0 860,213 - GFF2164 0.78 +0.5 860,213 - GFF2164 0.78 +0.7 860,500 + +0.3 860,500 + -0.3 860,501 - +0.5 860,501 - -1.0 860,501 - +1.5 860,501 - +0.4 860,764 + GFF2165 0.12 +0.9 860,908 + GFF2165 0.19 +0.6 861,613 + GFF2165 0.54 +0.3 861,613 + GFF2165 0.54 +0.2 861,613 + GFF2165 0.54 -0.3 861,614 - GFF2165 0.54 -1.6 861,614 - GFF2165 0.54 -0.5 861,614 - GFF2165 0.54 +0.6 861,614 - GFF2165 0.54 -0.4 861,614 - GFF2165 0.54 -0.2 861,614 - GFF2165 0.54 +0.2 861,614 - GFF2165 0.54 +0.7 861,614 - GFF2165 0.54 -0.3 861,943 + GFF2165 0.71 -0.6 861,952 + GFF2165 0.71 -0.8 861,952 + GFF2165 0.71 +0.2 861,952 + GFF2165 0.71 -0.0 861,952 + GFF2165 0.71 +0.5 861,953 - GFF2165 0.71 +1.9 861,953 - GFF2165 0.71 -0.3 862,384 + -0.9 862,411 + -1.1 862,411 + +0.9 862,411 + +0.6 862,412 - -1.6 862,412 - -1.2 862,474 + +1.0 862,475 - +0.9 862,475 - -0.3 862,809 + GFF2166 0.31 +0.1 862,825 - GFF2166 0.33 -0.6 862,869 + GFF2166 0.38 -0.9 863,202 + GFF2166 0.77 -0.5 863,203 - GFF2166 0.77 -0.5 863,256 + GFF2166 0.83 +0.6 863,257 - GFF2166 0.83 +0.7 863,257 - GFF2166 0.83 -0.9 863,257 - GFF2166 0.83 -0.8 863,257 - GFF2166 0.83 -1.6 863,285 - GFF2166 0.87 -0.7 863,379 + +0.7 863,379 + -0.4 863,520 - +0.2 863,521 + -1.7 863,522 - +0.6 863,530 + +0.3 863,531 - -1.6
Or see this region's nucleotide sequence