Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2123 and GFF2124 are separated by 2 nucleotides GFF2124 and GFF2125 overlap by 1 nucleotides
GFF2123 - hypothetical protein, at 807,050 to 810,982
GFF2123
GFF2124 - hypothetical protein, at 810,985 to 812,466
GFF2124
GFF2125 - hypothetical protein, at 812,466 to 813,557
GFF2125
Position (kb) 810
811
812
813 Strain fitness (log2 ratio) -2
-1
0
1 at 810.527 kb on - strand, within GFF2123 at 810.527 kb on - strand, within GFF2123 at 810.527 kb on - strand, within GFF2123 at 810.528 kb on + strand, within GFF2123 at 810.528 kb on + strand, within GFF2123 at 810.529 kb on - strand, within GFF2123 at 810.529 kb on - strand, within GFF2123 at 810.668 kb on + strand at 810.668 kb on + strand at 810.668 kb on + strand at 810.668 kb on + strand at 810.669 kb on - strand at 810.673 kb on + strand at 810.673 kb on + strand at 810.843 kb on + strand at 810.843 kb on + strand at 811.278 kb on - strand, within GFF2124 at 811.652 kb on + strand, within GFF2124 at 811.653 kb on - strand, within GFF2124 at 811.721 kb on + strand, within GFF2124 at 811.721 kb on + strand, within GFF2124 at 811.722 kb on - strand, within GFF2124 at 811.808 kb on + strand, within GFF2124 at 811.808 kb on + strand, within GFF2124 at 812.239 kb on - strand, within GFF2124 at 812.503 kb on + strand at 812.504 kb on - strand at 812.504 kb on - strand at 812.981 kb on + strand, within GFF2125 at 813.085 kb on + strand, within GFF2125 at 813.086 kb on - strand, within GFF2125 at 813.086 kb on - strand, within GFF2125 at 813.086 kb on - strand, within GFF2125 at 813.250 kb on + strand, within GFF2125 at 813.250 kb on + strand, within GFF2125 at 813.251 kb on - strand, within GFF2125 at 813.251 kb on - strand, within GFF2125 at 813.343 kb on + strand, within GFF2125 at 813.367 kb on + strand, within GFF2125
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 810,527 - GFF2123 0.88 +0.1 810,527 - GFF2123 0.88 -0.1 810,527 - GFF2123 0.88 +1.0 810,528 + GFF2123 0.88 -0.6 810,528 + GFF2123 0.88 +0.3 810,529 - GFF2123 0.88 +0.7 810,529 - GFF2123 0.88 -0.3 810,668 + +0.2 810,668 + +1.1 810,668 + +0.7 810,668 + +0.1 810,669 - -1.3 810,673 + -0.8 810,673 + +0.3 810,843 + -0.2 810,843 + -1.8 811,278 - GFF2124 0.20 -0.2 811,652 + GFF2124 0.45 -0.9 811,653 - GFF2124 0.45 -0.6 811,721 + GFF2124 0.50 -0.5 811,721 + GFF2124 0.50 -1.3 811,722 - GFF2124 0.50 -0.3 811,808 + GFF2124 0.56 -0.4 811,808 + GFF2124 0.56 -0.2 812,239 - GFF2124 0.85 +0.9 812,503 + -0.4 812,504 - +0.1 812,504 - -0.3 812,981 + GFF2125 0.47 -0.7 813,085 + GFF2125 0.57 -0.5 813,086 - GFF2125 0.57 +0.1 813,086 - GFF2125 0.57 -0.7 813,086 - GFF2125 0.57 -0.6 813,250 + GFF2125 0.72 +1.4 813,250 + GFF2125 0.72 -0.1 813,251 - GFF2125 0.72 +0.1 813,251 - GFF2125 0.72 -0.1 813,343 + GFF2125 0.80 +0.8 813,367 + GFF2125 0.83 -0.2
Or see this region's nucleotide sequence