Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1921 and GFF1922 are separated by 142 nucleotides GFF1922 and GFF1923 are separated by 3 nucleotides GFF1923 and GFF1924 are separated by 49 nucleotides GFF1924 and GFF1925 are separated by 31 nucleotides
GFF1921 - CO-responsive transcriptional regulator RcoM, at 580,072 to 580,872
GFF1921
GFF1922 - N(2)-fixation sustaining protein CowN, at 581,015 to 581,344
GFF1922
GFF1923 - hypothetical protein, at 581,348 to 581,848
GFF1923
GFF1924 - hypothetical protein, at 581,898 to 582,563
GFF1924
GFF1925 - Pyrroline-5-carboxylate reductase, at 582,595 to 583,431
GFF1925
Position (kb) 581
582 Strain fitness (log2 ratio) -1
0
1 at 580.627 kb on + strand, within GFF1921 at 580.641 kb on + strand, within GFF1921 at 580.732 kb on + strand, within GFF1921 at 581.110 kb on + strand, within GFF1922 at 581.111 kb on - strand, within GFF1922 at 581.111 kb on - strand, within GFF1922 at 581.111 kb on - strand, within GFF1922 at 581.261 kb on + strand, within GFF1922 at 581.262 kb on - strand, within GFF1922 at 581.264 kb on + strand, within GFF1922 at 581.264 kb on + strand, within GFF1922 at 581.264 kb on + strand, within GFF1922 at 581.264 kb on + strand, within GFF1922 at 581.264 kb on + strand, within GFF1922 at 581.264 kb on + strand, within GFF1922 at 581.265 kb on - strand, within GFF1922 at 581.265 kb on - strand, within GFF1922 at 581.265 kb on - strand, within GFF1922 at 581.265 kb on - strand, within GFF1922 at 581.265 kb on - strand, within GFF1922 at 581.265 kb on - strand, within GFF1922 at 581.265 kb on - strand, within GFF1922 at 581.265 kb on - strand, within GFF1922 at 581.265 kb on - strand, within GFF1922 at 581.423 kb on + strand, within GFF1923 at 581.775 kb on + strand, within GFF1923 at 581.775 kb on + strand, within GFF1923 at 581.775 kb on + strand, within GFF1923 at 581.776 kb on - strand, within GFF1923 at 581.784 kb on + strand, within GFF1923 at 581.814 kb on + strand at 581.815 kb on - strand at 581.815 kb on - strand at 581.886 kb on + strand at 581.886 kb on + strand at 581.980 kb on + strand, within GFF1924 at 582.579 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 580,627 + GFF1921 0.69 +0.8 580,641 + GFF1921 0.71 -1.3 580,732 + GFF1921 0.82 -0.5 581,110 + GFF1922 0.29 -0.3 581,111 - GFF1922 0.29 -1.3 581,111 - GFF1922 0.29 -0.4 581,111 - GFF1922 0.29 -0.2 581,261 + GFF1922 0.75 -0.1 581,262 - GFF1922 0.75 -0.2 581,264 + GFF1922 0.75 -0.6 581,264 + GFF1922 0.75 -0.2 581,264 + GFF1922 0.75 +0.5 581,264 + GFF1922 0.75 +0.5 581,264 + GFF1922 0.75 +1.5 581,264 + GFF1922 0.75 +1.1 581,265 - GFF1922 0.76 -0.2 581,265 - GFF1922 0.76 -0.2 581,265 - GFF1922 0.76 +0.0 581,265 - GFF1922 0.76 -0.1 581,265 - GFF1922 0.76 +1.1 581,265 - GFF1922 0.76 -0.5 581,265 - GFF1922 0.76 +0.0 581,265 - GFF1922 0.76 -0.2 581,265 - GFF1922 0.76 -0.1 581,423 + GFF1923 0.15 -0.8 581,775 + GFF1923 0.85 -0.1 581,775 + GFF1923 0.85 +0.1 581,775 + GFF1923 0.85 +0.9 581,776 - GFF1923 0.85 +0.8 581,784 + GFF1923 0.87 +0.3 581,814 + +0.2 581,815 - +1.7 581,815 - -0.5 581,886 + -0.2 581,886 + -0.4 581,980 + GFF1924 0.12 +0.1 582,579 + -1.0
Or see this region's nucleotide sequence