Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1832 and GFF1833 are separated by 102 nucleotides GFF1833 and GFF1834 are separated by 250 nucleotides GFF1834 and GFF1835 are separated by 31 nucleotides
GFF1832 - hypothetical protein, at 491,486 to 491,866
GFF1832
GFF1833 - hypothetical protein, at 491,969 to 492,205
GFF1833
GFF1834 - Crotonyl-CoA carboxylase/reductase, at 492,456 to 493,739
GFF1834
GFF1835 - hypothetical protein, at 493,771 to 495,048
GFF1835
Position (kb) 492
493
494 Strain fitness (log2 ratio) -1
0
1 at 491.469 kb on - strand at 491.564 kb on + strand, within GFF1832 at 491.565 kb on - strand, within GFF1832 at 491.591 kb on + strand, within GFF1832 at 491.592 kb on - strand, within GFF1832 at 491.592 kb on - strand, within GFF1832 at 491.880 kb on - strand at 492.412 kb on + strand at 492.412 kb on + strand at 492.507 kb on + strand at 492.507 kb on + strand at 492.508 kb on - strand at 492.508 kb on - strand at 492.555 kb on + strand at 492.555 kb on + strand at 492.555 kb on + strand at 492.555 kb on + strand at 492.555 kb on + strand at 492.556 kb on - strand at 492.556 kb on - strand at 493.015 kb on - strand, within GFF1834 at 493.015 kb on - strand, within GFF1834 at 493.015 kb on - strand, within GFF1834 at 493.015 kb on - strand, within GFF1834 at 493.086 kb on + strand, within GFF1834 at 493.087 kb on - strand, within GFF1834 at 493.087 kb on - strand, within GFF1834 at 493.197 kb on + strand, within GFF1834 at 493.198 kb on - strand, within GFF1834 at 493.284 kb on + strand, within GFF1834 at 493.285 kb on - strand, within GFF1834 at 493.285 kb on - strand, within GFF1834 at 493.285 kb on - strand, within GFF1834 at 493.363 kb on - strand, within GFF1834 at 493.479 kb on + strand, within GFF1834 at 493.479 kb on + strand, within GFF1834 at 493.479 kb on + strand, within GFF1834 at 493.590 kb on + strand, within GFF1834 at 493.937 kb on + strand, within GFF1835 at 494.133 kb on - strand, within GFF1835 at 494.451 kb on - strand, within GFF1835 at 494.528 kb on + strand, within GFF1835 at 494.564 kb on + strand, within GFF1835 at 494.663 kb on + strand, within GFF1835 at 494.672 kb on + strand, within GFF1835 at 494.672 kb on + strand, within GFF1835 at 494.673 kb on - strand, within GFF1835
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 491,469 - +0.1 491,564 + GFF1832 0.20 -1.0 491,565 - GFF1832 0.21 -0.3 491,591 + GFF1832 0.28 -0.3 491,592 - GFF1832 0.28 +1.5 491,592 - GFF1832 0.28 -0.4 491,880 - +1.4 492,412 + -0.2 492,412 + -0.2 492,507 + +0.2 492,507 + -0.4 492,508 - -0.1 492,508 - -0.7 492,555 + +0.1 492,555 + -0.0 492,555 + -0.7 492,555 + -0.3 492,555 + +0.9 492,556 - -0.7 492,556 - -0.2 493,015 - GFF1834 0.44 +1.0 493,015 - GFF1834 0.44 -1.0 493,015 - GFF1834 0.44 -1.0 493,015 - GFF1834 0.44 +0.2 493,086 + GFF1834 0.49 +0.8 493,087 - GFF1834 0.49 +0.5 493,087 - GFF1834 0.49 -0.1 493,197 + GFF1834 0.58 -0.4 493,198 - GFF1834 0.58 -0.7 493,284 + GFF1834 0.64 -0.9 493,285 - GFF1834 0.65 -0.5 493,285 - GFF1834 0.65 +1.6 493,285 - GFF1834 0.65 -1.2 493,363 - GFF1834 0.71 +0.0 493,479 + GFF1834 0.80 -0.6 493,479 + GFF1834 0.80 +0.6 493,479 + GFF1834 0.80 +0.7 493,590 + GFF1834 0.88 -0.3 493,937 + GFF1835 0.13 -0.1 494,133 - GFF1835 0.28 +0.0 494,451 - GFF1835 0.53 -0.3 494,528 + GFF1835 0.59 +1.0 494,564 + GFF1835 0.62 -0.3 494,663 + GFF1835 0.70 +0.4 494,672 + GFF1835 0.71 -0.9 494,672 + GFF1835 0.71 +0.2 494,673 - GFF1835 0.71 -0.3
Or see this region's nucleotide sequence