Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1733 and GFF1734 are separated by 196 nucleotides GFF1734 and GFF1735 are separated by 246 nucleotides
GFF1733 - UvrABC system protein C, at 380,138 to 382,498
GFF1733
GFF1734 - hypothetical protein, at 382,695 to 383,300
GFF1734
GFF1735 - hypothetical protein, at 383,547 to 384,242
GFF1735
Position (kb) 382
383
384 Strain fitness (log2 ratio) -2
-1
0
1
2 at 381.762 kb on + strand, within GFF1733 at 381.762 kb on + strand, within GFF1733 at 381.762 kb on + strand, within GFF1733 at 381.762 kb on + strand, within GFF1733 at 381.763 kb on - strand, within GFF1733 at 381.763 kb on - strand, within GFF1733 at 381.763 kb on - strand, within GFF1733 at 381.850 kb on - strand, within GFF1733 at 381.852 kb on + strand, within GFF1733 at 381.852 kb on + strand, within GFF1733 at 381.927 kb on + strand, within GFF1733 at 381.927 kb on + strand, within GFF1733 at 381.928 kb on - strand, within GFF1733 at 382.176 kb on + strand, within GFF1733 at 382.176 kb on + strand, within GFF1733 at 382.422 kb on + strand at 382.423 kb on - strand at 382.426 kb on + strand at 382.427 kb on - strand at 382.490 kb on + strand at 382.491 kb on - strand at 382.491 kb on - strand at 382.567 kb on + strand at 382.571 kb on + strand at 382.571 kb on + strand at 382.572 kb on - strand at 382.572 kb on - strand at 382.572 kb on - strand at 382.576 kb on - strand at 382.576 kb on - strand at 382.578 kb on + strand at 382.579 kb on - strand at 382.827 kb on + strand, within GFF1734 at 382.827 kb on + strand, within GFF1734 at 382.827 kb on + strand, within GFF1734 at 382.912 kb on - strand, within GFF1734 at 382.989 kb on + strand, within GFF1734 at 383.055 kb on + strand, within GFF1734 at 383.076 kb on + strand, within GFF1734 at 383.077 kb on - strand, within GFF1734 at 383.158 kb on + strand, within GFF1734 at 383.267 kb on + strand at 383.310 kb on + strand at 383.368 kb on - strand at 383.480 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 381,762 + GFF1733 0.69 +0.2 381,762 + GFF1733 0.69 +1.1 381,762 + GFF1733 0.69 -1.0 381,762 + GFF1733 0.69 -1.5 381,763 - GFF1733 0.69 -2.0 381,763 - GFF1733 0.69 -0.3 381,763 - GFF1733 0.69 +1.0 381,850 - GFF1733 0.73 +0.7 381,852 + GFF1733 0.73 +0.0 381,852 + GFF1733 0.73 -1.2 381,927 + GFF1733 0.76 +0.2 381,927 + GFF1733 0.76 +0.7 381,928 - GFF1733 0.76 +0.7 382,176 + GFF1733 0.86 +0.7 382,176 + GFF1733 0.86 +0.0 382,422 + +1.0 382,423 - -0.0 382,426 + +0.2 382,427 - +0.4 382,490 + +0.8 382,491 - -0.2 382,491 - -0.1 382,567 + +0.8 382,571 + +0.3 382,571 + +0.6 382,572 - +2.6 382,572 - +0.2 382,572 - +0.5 382,576 - -0.3 382,576 - +0.5 382,578 + -0.6 382,579 - -0.2 382,827 + GFF1734 0.22 -0.4 382,827 + GFF1734 0.22 +0.1 382,827 + GFF1734 0.22 +0.7 382,912 - GFF1734 0.36 -0.8 382,989 + GFF1734 0.49 -2.3 383,055 + GFF1734 0.59 +1.4 383,076 + GFF1734 0.63 +0.0 383,077 - GFF1734 0.63 -0.9 383,158 + GFF1734 0.76 -0.1 383,267 + +1.1 383,310 + -0.3 383,368 - +0.8 383,480 + -0.2
Or see this region's nucleotide sequence