Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1484 and GFF1485 overlap by 1 nucleotides GFF1485 and GFF1486 overlap by 4 nucleotides GFF1486 and GFF1487 are separated by 23 nucleotides
GFF1484 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 122,520 to 123,587
GFF1484
GFF1485 - Lactose transport system permease protein LacG, at 123,587 to 124,453
GFF1485
GFF1486 - sn-glycerol-3-phosphate transport system permease protein UgpA, at 124,450 to 125,331
GFF1486
GFF1487 - sn-glycerol-3-phosphate-binding periplasmic protein UgpB, at 125,355 to 126,707
GFF1487
Position (kb) 124
125
126 Strain fitness (log2 ratio) -2
-1
0
1 at 123.786 kb on + strand, within GFF1485 at 123.786 kb on + strand, within GFF1485 at 123.786 kb on + strand, within GFF1485 at 124.132 kb on - strand, within GFF1485 at 124.132 kb on - strand, within GFF1485 at 124.132 kb on - strand, within GFF1485 at 124.252 kb on - strand, within GFF1485 at 124.574 kb on + strand, within GFF1486 at 124.575 kb on - strand, within GFF1486 at 124.575 kb on - strand, within GFF1486 at 124.575 kb on - strand, within GFF1486 at 124.575 kb on - strand, within GFF1486 at 124.662 kb on - strand, within GFF1486 at 124.755 kb on + strand, within GFF1486 at 124.820 kb on + strand, within GFF1486 at 124.821 kb on - strand, within GFF1486 at 124.873 kb on - strand, within GFF1486 at 124.873 kb on - strand, within GFF1486 at 124.873 kb on - strand, within GFF1486 at 124.887 kb on - strand, within GFF1486 at 124.991 kb on + strand, within GFF1486 at 124.991 kb on + strand, within GFF1486 at 125.132 kb on + strand, within GFF1486 at 125.132 kb on + strand, within GFF1486 at 125.133 kb on - strand, within GFF1486 at 125.133 kb on - strand, within GFF1486 at 125.176 kb on - strand, within GFF1486 at 125.314 kb on + strand at 125.314 kb on + strand at 125.314 kb on + strand at 125.314 kb on + strand at 125.315 kb on - strand at 125.315 kb on - strand at 125.356 kb on + strand at 125.356 kb on + strand at 125.357 kb on - strand at 125.584 kb on + strand, within GFF1487 at 125.585 kb on - strand, within GFF1487 at 125.585 kb on - strand, within GFF1487 at 125.585 kb on - strand, within GFF1487 at 125.587 kb on + strand, within GFF1487 at 125.588 kb on - strand, within GFF1487 at 125.635 kb on + strand, within GFF1487 at 125.635 kb on + strand, within GFF1487 at 125.636 kb on - strand, within GFF1487 at 125.710 kb on + strand, within GFF1487 at 125.711 kb on - strand, within GFF1487 at 125.711 kb on - strand, within GFF1487 at 125.803 kb on + strand, within GFF1487 at 125.803 kb on + strand, within GFF1487 at 125.935 kb on + strand, within GFF1487 at 125.935 kb on + strand, within GFF1487 at 125.935 kb on + strand, within GFF1487 at 125.936 kb on - strand, within GFF1487 at 126.090 kb on + strand, within GFF1487 at 126.295 kb on + strand, within GFF1487 at 126.298 kb on + strand, within GFF1487 at 126.298 kb on + strand, within GFF1487 at 126.299 kb on - strand, within GFF1487 at 126.299 kb on - strand, within GFF1487 at 126.319 kb on + strand, within GFF1487 at 126.319 kb on + strand, within GFF1487 at 126.319 kb on + strand, within GFF1487 at 126.319 kb on + strand, within GFF1487 at 126.320 kb on - strand, within GFF1487 at 126.320 kb on - strand, within GFF1487 at 126.320 kb on - strand, within GFF1487
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 123,786 + GFF1485 0.23 -0.3 123,786 + GFF1485 0.23 -0.0 123,786 + GFF1485 0.23 -0.3 124,132 - GFF1485 0.63 +0.4 124,132 - GFF1485 0.63 -0.3 124,132 - GFF1485 0.63 +0.0 124,252 - GFF1485 0.77 +0.1 124,574 + GFF1486 0.14 -0.4 124,575 - GFF1486 0.14 -0.7 124,575 - GFF1486 0.14 -0.3 124,575 - GFF1486 0.14 +0.2 124,575 - GFF1486 0.14 +0.4 124,662 - GFF1486 0.24 +0.6 124,755 + GFF1486 0.35 +0.2 124,820 + GFF1486 0.42 -0.1 124,821 - GFF1486 0.42 +1.2 124,873 - GFF1486 0.48 +0.0 124,873 - GFF1486 0.48 -0.6 124,873 - GFF1486 0.48 +0.1 124,887 - GFF1486 0.50 -0.5 124,991 + GFF1486 0.61 +0.4 124,991 + GFF1486 0.61 -1.5 125,132 + GFF1486 0.77 -0.1 125,132 + GFF1486 0.77 -0.1 125,133 - GFF1486 0.77 +0.7 125,133 - GFF1486 0.77 -0.0 125,176 - GFF1486 0.82 +0.0 125,314 + +0.7 125,314 + +0.1 125,314 + +0.1 125,314 + +0.2 125,315 - -0.5 125,315 - -0.7 125,356 + -0.6 125,356 + -0.1 125,357 - +0.1 125,584 + GFF1487 0.17 -2.0 125,585 - GFF1487 0.17 +0.6 125,585 - GFF1487 0.17 -0.5 125,585 - GFF1487 0.17 -0.5 125,587 + GFF1487 0.17 -0.7 125,588 - GFF1487 0.17 -1.5 125,635 + GFF1487 0.21 -0.2 125,635 + GFF1487 0.21 -1.1 125,636 - GFF1487 0.21 +0.3 125,710 + GFF1487 0.26 -0.1 125,711 - GFF1487 0.26 +0.3 125,711 - GFF1487 0.26 -0.1 125,803 + GFF1487 0.33 -0.6 125,803 + GFF1487 0.33 +0.1 125,935 + GFF1487 0.43 +0.2 125,935 + GFF1487 0.43 -0.0 125,935 + GFF1487 0.43 +0.8 125,936 - GFF1487 0.43 -0.1 126,090 + GFF1487 0.54 -0.1 126,295 + GFF1487 0.69 -0.8 126,298 + GFF1487 0.70 -0.1 126,298 + GFF1487 0.70 -1.0 126,299 - GFF1487 0.70 +0.2 126,299 - GFF1487 0.70 +0.6 126,319 + GFF1487 0.71 +0.9 126,319 + GFF1487 0.71 -1.5 126,319 + GFF1487 0.71 -0.3 126,319 + GFF1487 0.71 -0.2 126,320 - GFF1487 0.71 -1.1 126,320 - GFF1487 0.71 +0.9 126,320 - GFF1487 0.71 +0.2
Or see this region's nucleotide sequence