Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1022 and GFF1023 are separated by 87 nucleotides GFF1023 and GFF1024 overlap by 1 nucleotides GFF1024 and GFF1025 overlap by 4 nucleotides GFF1025 and GFF1026 overlap by 4 nucleotides
GFF1022 - Glutamine transport ATP-binding protein GlnQ, at 1,105,086 to 1,105,862
GFF1022
GFF1023 - hypothetical protein, at 1,105,950 to 1,106,279
GFF1023
GFF1024 - Dodecaprenyl-phosphate galacturonate synthase, at 1,106,279 to 1,107,025
GFF1024
GFF1025 - hypothetical protein, at 1,107,022 to 1,107,984
GFF1025
GFF1026 - Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase, at 1,107,981 to 1,109,714
GFF1026
Position (kb) 1106
1107
1108 Strain fitness (log2 ratio) -1
0
1 at 1105.607 kb on + strand, within GFF1022 at 1105.608 kb on - strand, within GFF1022 at 1105.951 kb on + strand at 1105.951 kb on + strand at 1105.951 kb on + strand at 1105.951 kb on + strand at 1106.008 kb on + strand, within GFF1023 at 1106.008 kb on + strand, within GFF1023 at 1106.009 kb on - strand, within GFF1023 at 1106.009 kb on - strand, within GFF1023 at 1106.009 kb on - strand, within GFF1023 at 1106.009 kb on - strand, within GFF1023 at 1106.059 kb on + strand, within GFF1023 at 1106.060 kb on - strand, within GFF1023 at 1106.069 kb on - strand, within GFF1023 at 1106.069 kb on - strand, within GFF1023 at 1106.069 kb on - strand, within GFF1023 at 1106.248 kb on + strand at 1106.248 kb on + strand at 1106.249 kb on - strand at 1106.249 kb on - strand at 1106.249 kb on - strand at 1106.269 kb on + strand at 1106.270 kb on - strand at 1106.270 kb on - strand at 1106.270 kb on - strand at 1106.270 kb on - strand at 1106.270 kb on - strand at 1106.272 kb on + strand at 1106.273 kb on - strand at 1106.273 kb on - strand at 1106.379 kb on + strand, within GFF1024 at 1106.380 kb on - strand, within GFF1024 at 1106.380 kb on - strand, within GFF1024 at 1106.436 kb on + strand, within GFF1024 at 1106.820 kb on + strand, within GFF1024 at 1106.821 kb on - strand, within GFF1024 at 1106.821 kb on - strand, within GFF1024 at 1106.925 kb on - strand, within GFF1024
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 1,105,607 + GFF1022 0.67 +0.9 1,105,608 - GFF1022 0.67 -0.7 1,105,951 + -0.1 1,105,951 + +1.3 1,105,951 + -1.2 1,105,951 + +0.8 1,106,008 + GFF1023 0.18 +0.3 1,106,008 + GFF1023 0.18 +0.6 1,106,009 - GFF1023 0.18 +0.2 1,106,009 - GFF1023 0.18 -0.7 1,106,009 - GFF1023 0.18 -0.2 1,106,009 - GFF1023 0.18 -0.4 1,106,059 + GFF1023 0.33 +0.5 1,106,060 - GFF1023 0.33 -0.2 1,106,069 - GFF1023 0.36 -0.9 1,106,069 - GFF1023 0.36 +0.0 1,106,069 - GFF1023 0.36 -0.4 1,106,248 + -0.5 1,106,248 + -0.3 1,106,249 - -0.2 1,106,249 - -0.0 1,106,249 - +1.6 1,106,269 + -1.6 1,106,270 - +0.0 1,106,270 - -0.4 1,106,270 - -0.2 1,106,270 - -0.9 1,106,270 - +0.4 1,106,272 + -0.6 1,106,273 - -0.0 1,106,273 - -0.6 1,106,379 + GFF1024 0.13 -0.9 1,106,380 - GFF1024 0.14 +0.1 1,106,380 - GFF1024 0.14 +0.8 1,106,436 + GFF1024 0.21 -0.0 1,106,820 + GFF1024 0.72 -0.2 1,106,821 - GFF1024 0.73 +0.3 1,106,821 - GFF1024 0.73 +0.1 1,106,925 - GFF1024 0.86 +0.6
Or see this region's nucleotide sequence