Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS02520 and ABZR88_RS02525 are separated by 311 nucleotides ABZR88_RS02525 and ABZR88_RS02530 are separated by 650 nucleotides
ABZR88_RS02520: ABZR88_RS02520 - hypothetical protein, at 574,093 to 575,052
_RS02520
ABZR88_RS02525: ABZR88_RS02525 - hypothetical protein, at 575,364 to 576,815
_RS02525
ABZR88_RS02530: ABZR88_RS02530 - hypothetical protein, at 577,466 to 578,722
_RS02530
Position (kb) 575
576
577 Strain fitness (log2 ratio) -1
0
1 at 574.460 kb on + strand, within ABZR88_RS02520 at 574.528 kb on - strand, within ABZR88_RS02520 at 574.586 kb on - strand, within ABZR88_RS02520 at 574.696 kb on - strand, within ABZR88_RS02520 at 574.784 kb on - strand, within ABZR88_RS02520 at 574.904 kb on + strand, within ABZR88_RS02520 at 575.005 kb on + strand at 575.140 kb on + strand at 575.220 kb on + strand at 575.256 kb on - strand at 575.272 kb on - strand at 575.447 kb on + strand at 575.480 kb on + strand at 575.539 kb on + strand, within ABZR88_RS02525 at 575.568 kb on + strand, within ABZR88_RS02525 at 575.569 kb on - strand, within ABZR88_RS02525 at 575.780 kb on + strand, within ABZR88_RS02525 at 575.847 kb on - strand, within ABZR88_RS02525 at 575.848 kb on + strand, within ABZR88_RS02525 at 575.883 kb on + strand, within ABZR88_RS02525 at 575.939 kb on + strand, within ABZR88_RS02525 at 576.053 kb on + strand, within ABZR88_RS02525 at 576.085 kb on + strand, within ABZR88_RS02525 at 576.104 kb on - strand, within ABZR88_RS02525 at 576.109 kb on + strand, within ABZR88_RS02525 at 576.225 kb on - strand, within ABZR88_RS02525 at 576.278 kb on - strand, within ABZR88_RS02525 at 576.342 kb on - strand, within ABZR88_RS02525 at 576.710 kb on - strand at 576.772 kb on + strand at 576.989 kb on + strand at 577.070 kb on + strand at 577.071 kb on - strand at 577.199 kb on + strand at 577.265 kb on + strand at 577.266 kb on - strand at 577.348 kb on + strand at 577.349 kb on - strand at 577.516 kb on + strand at 577.659 kb on - strand, within ABZR88_RS02530 at 577.703 kb on + strand, within ABZR88_RS02530 at 577.709 kb on + strand, within ABZR88_RS02530
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 574,460 + ABZR88_RS02520 0.38 -0.3 574,528 - ABZR88_RS02520 0.45 -0.0 574,586 - ABZR88_RS02520 0.51 +0.3 574,696 - ABZR88_RS02520 0.63 +0.2 574,784 - ABZR88_RS02520 0.72 +0.0 574,904 + ABZR88_RS02520 0.84 +0.3 575,005 + -0.2 575,140 + +0.3 575,220 + +0.7 575,256 - +0.2 575,272 - +0.6 575,447 + -0.1 575,480 + +1.0 575,539 + ABZR88_RS02525 0.12 -0.4 575,568 + ABZR88_RS02525 0.14 -0.1 575,569 - ABZR88_RS02525 0.14 -0.2 575,780 + ABZR88_RS02525 0.29 -0.0 575,847 - ABZR88_RS02525 0.33 +0.6 575,848 + ABZR88_RS02525 0.33 -0.3 575,883 + ABZR88_RS02525 0.36 -0.3 575,939 + ABZR88_RS02525 0.40 -0.0 576,053 + ABZR88_RS02525 0.47 -1.2 576,085 + ABZR88_RS02525 0.50 +0.9 576,104 - ABZR88_RS02525 0.51 +0.2 576,109 + ABZR88_RS02525 0.51 +0.0 576,225 - ABZR88_RS02525 0.59 +0.4 576,278 - ABZR88_RS02525 0.63 +0.0 576,342 - ABZR88_RS02525 0.67 +0.1 576,710 - +0.2 576,772 + +0.1 576,989 + +0.1 577,070 + +0.1 577,071 - +0.2 577,199 + +0.4 577,265 + +0.3 577,266 - -0.5 577,348 + +0.0 577,349 - -0.2 577,516 + -0.1 577,659 - ABZR88_RS02530 0.15 +0.5 577,703 + ABZR88_RS02530 0.19 -0.2 577,709 + ABZR88_RS02530 0.19 -0.0
Or see this region's nucleotide sequence