Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS10920

Experiment: R2A 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS10905 and ABZR88_RS10910 are separated by 381 nucleotidesABZR88_RS10910 and ABZR88_RS10915 are separated by 164 nucleotidesABZR88_RS10915 and ABZR88_RS10920 are separated by 5 nucleotidesABZR88_RS10920 and ABZR88_RS10925 overlap by 4 nucleotides ABZR88_RS10905: ABZR88_RS10905 - hypothetical protein, at 2,656,692 to 2,656,919 _RS10905 ABZR88_RS10910: ABZR88_RS10910 - hypothetical protein, at 2,657,301 to 2,657,441 _RS10910 ABZR88_RS10915: ABZR88_RS10915 - hypothetical protein, at 2,657,606 to 2,657,815 _RS10915 ABZR88_RS10920: ABZR88_RS10920 - metallophosphoesterase, at 2,657,821 to 2,659,629 _RS10920 ABZR88_RS10925: ABZR88_RS10925 - hypothetical protein, at 2,659,626 to 2,660,645 _RS10925 Position (kb) 2657 2658 2659 2660Strain fitness (log2 ratio) -1 0 1at 2656.925 kb on + strandat 2656.926 kb on - strandat 2656.933 kb on - strandat 2656.957 kb on + strandat 2657.100 kb on - strandat 2657.230 kb on + strandat 2657.230 kb on + strandat 2657.289 kb on - strandat 2657.322 kb on - strand, within ABZR88_RS10910at 2657.643 kb on + strand, within ABZR88_RS10915at 2657.840 kb on + strandat 2657.942 kb on + strandat 2658.025 kb on - strand, within ABZR88_RS10920at 2658.108 kb on + strand, within ABZR88_RS10920at 2658.236 kb on + strand, within ABZR88_RS10920at 2658.236 kb on + strand, within ABZR88_RS10920at 2658.247 kb on - strand, within ABZR88_RS10920at 2658.742 kb on - strand, within ABZR88_RS10920at 2658.790 kb on - strand, within ABZR88_RS10920at 2658.841 kb on + strand, within ABZR88_RS10920at 2658.916 kb on + strand, within ABZR88_RS10920at 2659.045 kb on + strand, within ABZR88_RS10920at 2659.244 kb on - strand, within ABZR88_RS10920at 2659.281 kb on - strand, within ABZR88_RS10920at 2659.610 kb on - strandat 2659.612 kb on - strandat 2659.629 kb on + strandat 2659.784 kb on - strand, within ABZR88_RS10925at 2659.842 kb on + strand, within ABZR88_RS10925at 2659.954 kb on - strand, within ABZR88_RS10925at 2659.954 kb on - strand, within ABZR88_RS10925at 2660.167 kb on + strand, within ABZR88_RS10925at 2660.175 kb on - strand, within ABZR88_RS10925at 2660.272 kb on + strand, within ABZR88_RS10925at 2660.487 kb on - strand, within ABZR88_RS10925at 2660.608 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A 30C
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2,656,925 + -0.5
2,656,926 - +0.0
2,656,933 - +0.5
2,656,957 + -0.0
2,657,100 - -0.7
2,657,230 + -0.7
2,657,230 + -0.0
2,657,289 - -0.2
2,657,322 - ABZR88_RS10910 0.15 +0.0
2,657,643 + ABZR88_RS10915 0.18 +0.7
2,657,840 + +0.0
2,657,942 + +0.1
2,658,025 - ABZR88_RS10920 0.11 -0.2
2,658,108 + ABZR88_RS10920 0.16 -0.1
2,658,236 + ABZR88_RS10920 0.23 +0.2
2,658,236 + ABZR88_RS10920 0.23 -0.0
2,658,247 - ABZR88_RS10920 0.24 -0.6
2,658,742 - ABZR88_RS10920 0.51 +0.3
2,658,790 - ABZR88_RS10920 0.54 -0.0
2,658,841 + ABZR88_RS10920 0.56 +0.0
2,658,916 + ABZR88_RS10920 0.61 +0.2
2,659,045 + ABZR88_RS10920 0.68 -0.3
2,659,244 - ABZR88_RS10920 0.79 +1.0
2,659,281 - ABZR88_RS10920 0.81 +0.4
2,659,610 - -0.0
2,659,612 - -0.1
2,659,629 + -0.2
2,659,784 - ABZR88_RS10925 0.15 -0.2
2,659,842 + ABZR88_RS10925 0.21 -0.0
2,659,954 - ABZR88_RS10925 0.32 +0.1
2,659,954 - ABZR88_RS10925 0.32 -0.0
2,660,167 + ABZR88_RS10925 0.53 -0.0
2,660,175 - ABZR88_RS10925 0.54 +0.0
2,660,272 + ABZR88_RS10925 0.63 +0.1
2,660,487 - ABZR88_RS10925 0.84 -1.1
2,660,608 + +0.0

Or see this region's nucleotide sequence